Pre_GI: BLASTP Hits

Some Help

Query: NC_013941:699286:708248 Escherichia coli O55:H7 str. CB9615 chromosome, complete genome

Start: 708248, End: 709774, Length: 1527

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The E. coli O55:H7 strain CB9615 was isolated from an infant with diarrhea in Germany in 2003 and confirmed to belong to the same sequence type (ST11) as the O157:H7 clone by multilocus sequence typing. The O55:H7 and O157:H7 E. coli clones have been shown to be closely related. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013008:2910567:2923628292362829251541527Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeDLP12 prophage recombinase01046
AC_000091:558920:5681255681255696511527Escherichia coli W3110 DNA, complete genomepredicted recombinase01046
NC_000913:558920:5681255681255696511527Escherichia coli K12, complete genomeDLP12 prophage; predicted recombinase01046
NC_010473:498252:5074575074575089831527Escherichia coli str. K-12 substr. DH10B, complete genomeDLP12 prophage; predicted recombinase01046
NC_011353:2957962:2968757296875729702831527Escherichia coli O157:H7 str. EC4115 chromosome, complete genomerecombinase family protein01046
NC_012759:461680:4708854708854724111527Escherichia coli BW2952 chromosome, complete genomeDLP12 prophage; putative recombinase01046
NC_012947:3231893:3243361324336132448871527Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeRecombinase01046
NC_012967:531000:5407925407925423181527Escherichia coli B str. REL606 chromosome, complete genomeputative recombinase01046
NC_011415:600375:6208596208596223851527Escherichia coli SE11 chromosome, complete genomeputative phage recombinase01027
CU928145:824367:8316568316568331821527Escherichia coli 55989 chromosome, complete genomeputative site-specific invertase; DLP12 prophage01025
NC_011748:824367:8316568316568331821527Escherichia coli 55989, complete genomeputative site-specific invertase; DLP12 prophage01025
NC_004547:2810151:2825271282527128268811611Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeputative integrase/recombinase3e-94345
NC_011769:3434744:3450826345082634525981773Desulfovibrio vulgaris str. 'Miyazaki F', complete genomeRecombinase3e-51202
NC_009659:3520093:3543028354302835448781851Janthinobacterium sp. Marseille chromosome, complete genomesite-specific recombinase6e-49195
NC_007519:2773000:2776921277692127788551935Desulfovibrio alaskensis G20 chromosome, complete genomehypothetical protein1e-48194
NC_011979:646518:6672356672356690941860Geobacter sp. FRC-32, complete genomeRecombinase7e-45182
NC_009801:1392696:1412677141267714141971521Escherichia coli E24377A, complete genomeputative recombinase7e-45182
NC_011146:4196652:4202142420214242037791638Geobacter bemidjiensis Bem, complete genomeRecombinase5e-45182
NC_007517:3524715:3540161354016135420291869Geobacter metallireducens GS-15, complete genomeResolvase-like:Recombinase2e-44180
NC_007614:109000:1135631135631151971635Nitrosospira multiformis ATCC 25196 chromosome 1, completeRecombinase5e-44179
NC_011979:773673:7870917870917889321842Geobacter sp. FRC-32, complete genomeRecombinase8e-44178
NC_002947:1268089:1281215128121512829061692Pseudomonas putida KT2440, complete genomerecombinase-related protein2e-42174
NC_002678:3701500:3705162370516237068981737Mesorhizobium loti MAFF303099, complete genomesite-specific recombinase2e-42174
NC_011283:2185462:2199912219991222014831572Klebsiella pneumoniae 342 chromosome, complete genomesite-specific recombinase, resolvase family2e-42174
NC_013850:2103469:2133323213332321348941572Klebsiella variicola At-22 chromosome, complete genomeResolvase domain protein1e-42174
NC_007493:1672163:1704748170474817062771530Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequenceputative site-specific recombinase1e-42174
NC_007384:2007467:2008715200871520102351521Shigella sonnei Ss046, complete genomehypothetical bacteriophage protein2e-41170
NC_016812:4246542:4250124425012442512931170Sinorhizobium fredii HH103, complete genomesite-specific recombinase3e-41169
NC_007347:3612918:3619050361905036208191770Ralstonia eutropha JMP134 chromosome 1, complete sequenceRecombinase2e-39164
NC_010338:3743000:3747659374765937493741716Caulobacter sp. K31, complete genomeRecombinase4e-38159
NC_007492:3954345:3962384396238439639821599Pseudomonas fluorescens PfO-1, complete genomeRecombinase5e-36152
NC_009832:1664238:1681671168167116831821512Serratia proteamaculans 568, complete genomeResolvase domain2e-35150
NC_014006:850763:8565128565128582571746Sphingobium japonicum UT26S chromosome 1, complete genomeinvertase/recombinase like protein4e-33142
NC_014121:2330451:2335767233576723375361770Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein5e-33142
NC_020209:4549563:4562999456299945646901692Pseudomonas poae RE*1-1-14, complete genomerecombinase5e-33142
NC_017047:3085000:3123842312384231255751734Rahnella aquatilis HX2 chromosome, complete genomehypothetical protein1e-32141
NC_007384:1086025:1089944108994410911881245Shigella sonnei Ss046, complete genomehypothetical protein9e-33141
NC_014375:1242750:1243226124322612449291704Brevundimonas subvibrioides ATCC 15264 chromosome, complete genomeRecombinase7e-31135
NC_012988:2455807:2460335246033524620831749Methylobacterium extorquens DM4, complete genomerecombinase2e-30134
NC_002947:3404000:3412988341298834146131626Pseudomonas putida KT2440, complete genomephage recombinase, putative4e-30133
NC_009778:2227627:2270858227085822726601803Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein1e-29131
NC_012559:854507:8853478853478863481002Laribacter hongkongensis HLHK9, complete genomeRecombinase3e-29130
NC_008463:1912348:1939714193971419412911578Pseudomonas aeruginosa UCBPP-PA14, complete genomepossible recombinase7e-29129
NC_008781:2575213:2579464257946425810861623Polaromonas naphthalenivorans CJ2, complete genomeRecombinase1e-27124
NC_004578:2560473:2566716256671625683201605Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein2e-26120
NC_015633:1702000:1709920170992017117971878Vibrio anguillarum 775 chromosome chromosome I, complete sequenceSite-specific recombinase2e-26120
NC_003910:486776:4939534939534959982046Colwellia psychrerythraea 34H, complete genomeputative site-specific recombinase1e-25118
NC_017047:1796000:1800214180021418019651752Rahnella aquatilis HX2 chromosome, complete genomehypothetical protein5e-25116
NC_016616:760145:7740577740577757781722Dechlorosoma suillum PS chromosome, complete genomesite-specific recombinase, DNA invertase Pin6e-25115
NC_016614:1178000:1189433118943311912291797Vibrio sp. EJY3 chromosome 2, complete sequencesite-specific recombinase2e-24114
NC_018678:1820390:1826786182678618284561671Alteromonas macleodii str. 'English Channel 673' chromosome,site-specific recombinase1e-20101
NC_020211:2012480:2021007202100720226861680Serratia marcescens WW4, complete genomeputative recombinase, DLP12 prophage2e-20101
NC_014121:2514544:2525778252577825277872010Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein3e-20100
NC_010501:908000:9248249248249264701647Pseudomonas putida W619, complete genomeResolvase domain3e-1997.1
NC_005070:1088808:1099790109979011016881899Synechococcus sp. WH 8102, complete genomepossible site-specific recombinase2e-1894.4
NC_005070:1331741:1342597134259713446002004Synechococcus sp. WH 8102, complete genomepartial homology to phage recombinase2e-1791.3
NC_016822:1431200:1439276143927614411591884Shigella sonnei 53G, complete genomehypothetical protein1e-1791.3
NC_021066:3201500:3217811321781132193071497Raoultella ornithinolytica B6, complete genomeputative recombinase, DLP12 prophage2e-1480.9
NC_017986:5509569:5518050551805055194201371Pseudomonas putida ND6 chromosome, complete genomephage recombinase4e-1480.1
NC_014638:363577:3836373836373853131677Bifidobacterium bifidum PRL2010 chromosome, complete genomerecombinase family protein1e-1275.1
NC_013364:1997891:200295320029532003306354Escherichia coli O111:H- str. 11128, complete genome5e-1273.2
NC_007644:280000:2846452846452860961452Moorella thermoacetica ATCC 39073, complete genome4e-1170.1
NC_020387:1257163:1279079127907912807341656Dehalococcoides mccartyi BTF08, complete genomesite-specific recombinase, resolvase family6e-1169.3
NC_016048:2873669:2896091289609128977101620Oscillibacter valericigenes Sjm18-20, complete genomeputative site-specific recombinase1e-1068.6
NC_006582:2944237:2992454299245429938571404Bacillus clausii KSM-K16, complete genomesite-specific recombinase for integration and excision2e-1068.2
NC_013890:103807:1052911052911069101620Dehalococcoides sp. GT chromosome, complete genomeResolvase domain protein6e-1065.9
NC_015425:2528549:2528549252854925301351587Clostridium botulinum BKT015925 chromosome, complete genomesite-specific recombinase, resolvase family7e-1065.9
NC_014538:2158131:2183214218321421847341521Thermoanaerobacter sp. X513 chromosome, complete genomeRecombinase8e-1065.9
NC_015278:176508:1893931893931910631671Aerococcus urinae ACS-120-V-Col10a chromosome, complete genomeresolvase, N-terminal domain protein4e-0963.5
NC_012416:573202:5811505811505826431494Wolbachia sp. wRi, complete genomesite-specific recombinase, resolvase family4e-0963.5
NC_012416:1079661:1087609108760910891021494Wolbachia sp. wRi, complete genomesite-specific recombinase, resolvase family4e-0963.5
NC_009455:273519:3106353106353122811647Dehalococcoides sp. BAV1 chromosome, complete genomeresolvase domain-containing protein3e-0963.5
NC_016627:793583:7976187976187991341517Clostridium clariflavum DSM 19732 chromosome, complete genome4e-0963.2
NC_009706:2673906:2695449269544926970201572Clostridium kluyveri DSM 555 chromosome, complete genomehypothetical protein4e-0963.2
NC_011837:2605409:2626952262695226285231572Clostridium kluyveri NBRC 12016, complete genomehypothetical protein4e-0963.2
NC_011898:3367457:3370767337076733723381572Clostridium cellulolyticum H10, complete genomeResolvase domain protein4e-0963.2
NC_015697:506494:5307365307365322891554Lactobacillus reuteri SD2112 chromosome, complete genomephage integrase family site-specific recombinase2e-0860.8
NC_010320:1268355:1311640131164013132111572Thermoanaerobacter sp. X514 chromosome, complete genomeresolvase domain-containing protein5e-0859.7
NC_014538:1598106:1601171160117116027421572Thermoanaerobacter sp. X513 chromosome, complete genomeResolvase domain-containing protein5e-0859.7
NC_002936:1395432:1398114139811413997781665Dehalococcoides ethenogenes 195, complete genomeresolvase domain protein1e-0758.5
NC_014394:1815638:1825770182577018274041635Gallionella capsiferriformans ES-2 chromosome, complete genomeResolvase domain1e-0758.5
NC_016791:3953972:3961343396134339629921650Clostridium sp. BNL1100 chromosome, complete genomesite-specific recombinase, DNA invertase Pin1e-0758.2
NC_013552:1187299:1189131118913111907831653Dehalococcoides sp. VS, complete genomessrA integrase2e-0758.2
NC_012583:440420:4472494472494489071659Vibrio cholerae O395 chromosome chromosome II, complete sequencehypothetical protein2e-0758.2
NC_009456:787322:8150358150358166931659Vibrio cholerae O395 chromosome 1, complete sequencehypothetical protein2e-0758.2
NC_007432:654904:7003617003617017071347Streptococcus agalactiae A909, complete genomeprophage LambdaSa04, site-specific recombinase, resolvase family2e-0757.8
NC_020387:1257163:1258468125846812601351668Dehalococcoides mccartyi BTF08, complete genomesite-specific recombinase, resolvase family2e-0757.8
NC_013768:1802313:1809907180990718115501644Listeria monocytogenes 08-5923, complete genomeDNA recombinase, putative2e-0757.4
NC_013766:1835964:1843176184317618448191644Listeria monocytogenes 08-5578 chromosome, complete genomeDNA recombinase2e-0757.4
NC_015977:2445835:2452242245224224538281587Roseburia hominis A2-183 chromosome, complete genomehypothetical protein2e-0757.4
NC_012667:931390:9402429402429419121671Vibrio cholerae MJ-1236 chromosome 2, complete genomehypothetical protein3e-0757.4
NC_012563:2597934:2611695261169526133171623Clostridium botulinum A2 str. Kyoto, complete genomeresolvase3e-0757
NC_014393:1022843:1035656103565610372451590Clostridium cellulovorans 743B chromosome, complete genomeResolvase domain3e-0757
NC_013890:1142500:1143359114335911450261668Dehalococcoides sp. GT chromosome, complete genomeResolvase domain protein4e-0756.6
NC_007356:1165760:1165760116576011674271668Dehalococcoides sp. CBDB1, complete genomeprobable site-specific recombinase5e-0756.6
NC_013890:1142500:1168802116880211704541653Dehalococcoides sp. GT chromosome, complete genomeResolvase domain protein5e-0756.2
NC_009455:1025915:1030391103039110319051515Dehalococcoides sp. BAV1 chromosome, complete genomeresolvase domain-containing protein7e-0755.8
NC_013890:103807:1038071038071052641458Dehalococcoides sp. GT chromosome, complete genome1e-0654.7