Pre_GI: BLASTP Hits

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Query: NC_013941:699286:703945 Escherichia coli O55:H7 str. CB9615 chromosome, complete genome

Start: 703945, End: 704559, Length: 615

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The E. coli O55:H7 strain CB9615 was isolated from an infant with diarrhea in Germany in 2003 and confirmed to belong to the same sequence type (ST11) as the O157:H7 clone by multilocus sequence typing. The O55:H7 and O157:H7 E. coli clones have been shown to be closely related. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013008:2910567:293015629301562930770615Escherichia coli O157:H7 str. TW14359 chromosome, complete genomephage-related repressor protein1e-116418
NC_011353:2957962:297528529752852975899615Escherichia coli O157:H7 str. EC4115 chromosome, complete genomerepressor protein1e-116418
CU928145:824367:827354827354828109756Escherichia coli 55989 chromosome, complete genomeRegulatory protein CI from bacteriophage origin6e-116416
NC_011751:643976:651596651596652351756Escherichia coli UMN026 chromosome, complete genomeregulatory protein CI from bacteriophage origin6e-116416
NC_011748:824367:827354827354828109756Escherichia coli 55989, complete genomeRegulatory protein CI from bacteriophage origin6e-116416
NC_011740:2769961:278688227868822787610729Escherichia fergusonii ATCC 35469, complete genomeRegulatory protein CI from bacteriophage origin7e-102369
NC_011415:600375:616589616589617281693Escherichia coli SE11 chromosome, complete genomephage transcriptional regulator1e-101368
NC_015663:4522109:453774545377454538440696Enterobacter aerogenes KCTC 2190 chromosome, complete genomeputative phage repressor protein CI2e-91334
NC_006511:2501500:251687725168772517566690Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCtranscriptional activator-regulatory protein2e-91334
NC_011147:2496808:251241325124132513102690Salmonella enterica subsp. enterica serovar Paratyphi A strtranscriptional activator-regulatory protein2e-91334
NC_016860:364981:379270379270379959690Salmonella enterica subsp. enterica serovar Typhimurium strtranscriptional activator-regulatory protein2e-91334
NC_020063:2565605:258390425839042584608705Enterobacteriaceae bacterium strain FGI 57, complete genomeputative transcriptional regulator1e-83308
NC_015062:99969:103850103850104560711Rahnella sp. Y9602 plasmid pRAHAQ01, complete sequencephage repressor1e-68258
NC_016845:1285435:129456012945601294928369Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,regulatory protein CI bacteriophage origin3e-61234
NC_017060:59500:102616102616103311696Rahnella aquatilis HX2 plasmid PRA1, complete sequencephage repressor protein8e-43173
NC_013282:1804909:181500918150091815710702Cronobacter turicensis, complete genome26 kDa repressor protein1e-41169
NC_013716:2764550:276546227654622766157696Citrobacter rodentium ICC168, complete genomeputative phage repressor protein5e-40164
NC_014562:1772842:178459717845971785031435Pantoea vagans C9-1 chromosome, complete genome26 kDa repressor protein (Regulatory protein CI)4e-39160
NC_009832:2211154:223063522306352231279645Serratia proteamaculans 568, complete genomeputative phage repressor1e-37155
NC_009436:2776410:281841528184152818849435Enterobacter sp. 638, complete genomephage repressor1e-35149
NC_014121:2745097:275440527544052755277873Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative repressor protein1e-34145
NC_013282:1200993:121435412143541214710357Cronobacter turicensis, complete genome26 kDa repressor protein2e-28125
NC_016612:4119410:412503641250364125572537Klebsiella oxytoca KCTC 1686 chromosome, complete genomeputative phage repressor5e-25114
NC_009655:1357486:136895013689501369636687Actinobacillus succinogenes 130Z chromosome, complete genomeputative phage repressor3e-24111
NC_013361:3287671:329508932950893295796708Escherichia coli O26:H11 str. 11368 chromosome, complete genomephage repressor protein CI8e-1890.1
NC_009256:1253384:126083512608351261551717Burkholderia vietnamiensis G4 chromosome 1, complete sequenceputative phage repressor7e-1787
NC_017033:2081206:209160520916052092288684Frateuria aurantia DSM 6220 chromosome, complete genomeputative transcriptional regulator2e-1685.5
NC_017033:1052000:106474010647401065435696Frateuria aurantia DSM 6220 chromosome, complete genomeputative transcriptional regulator5e-1684.3
NC_009567:904922:904922904922905692771Haemophilus influenzae PittGG chromosome, complete genomehypothetical protein3e-1581.6
NC_014034:3111981:311804831180483118797750Rhodobacter capsulatus SB1003 chromosome, complete genomeXRE family transcriptional regulator1e-1480.1
NC_007146:1405459:142911714291171430085969Haemophilus influenzae 86-028NP, complete genomehypothetical protein1e-1479.7
NC_014922:825396:848309848309849277969Haemophilus influenzae F3047 chromosome, complete genomehypothetical protein2e-1479
NC_007712:3067000:309927530992753099997723Sodalis glossinidius str. 'morsitans', complete genomeputative transcriptional regulator5e-1477.8
NC_009778:959982:977343977343978032690Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein1e-1273.2
NC_007794:2304768:232155423215542322195642Novosphingobium aromaticivorans DSM 12444, complete genomeputative phage repressor1e-1066.6
NC_008343:1631780:163896216389621639738777Granulibacter bethesdensis CGDNIH1, complete genometranscriptional repressor2e-1065.9
NC_017506:3248724:325658932565893257266678Marinobacter adhaerens HP15 chromosome, complete genomephage repressor3e-1065.1
NC_012691:779826:793864793864794634771Tolumonas auensis DSM 9187, complete genomeputative phage repressor4e-1064.7
NC_017986:4885979:490546349054634906305843Pseudomonas putida ND6 chromosome, complete genomeprophage PSPPH03, Cro/CI family transcriptional regulator4e-1064.3
NC_015733:1943385:195415219541521954856705Pseudomonas putida S16 chromosome, complete genomeputative phage repressor6e-1064.3
NC_012559:1888000:189387718938771894665789Laribacter hongkongensis HLHK9, complete genomeTranscriptional regulator7e-1063.9
NC_009656:2422083:243403424340342434885852Pseudomonas aeruginosa PA7 chromosome, complete genomeCro/CI family transcriptional regulator8e-1063.5
NC_010322:1336231:134720713472071347911705Pseudomonas putida GB-1 chromosome, complete genomeputative phage repressor2e-0962
NC_015563:4583906:459614345961434596862720Delftia sp. Cs1-4 chromosome, complete genomeputative phage repressor6e-0960.8
NC_007722:2954876:296208129620812962716636Erythrobacter litoralis HTCC2594, complete genomeprophage MuMc02, peptidase, family S246e-0960.8
NC_009512:2238437:225511622551162255985870Pseudomonas putida F1, complete genomeputative phage repressor9e-0960.1
NC_002947:4293252:429936842993684300237870Pseudomonas putida KT2440, complete genomerepressor protein-related protein9e-0960.1
NC_010814:294394:306642306642307334693Geobacter lovleyi SZ, complete genomeputative phage repressor2e-0859.3
NC_015386:125499:125499125499126119621Treponema succinifaciens DSM 2489 plasmid pTRESU01, completeputative phage repressor4e-0858.2
NC_015386:107000:125499125499126119621Treponema succinifaciens DSM 2489 plasmid pTRESU01, completeputative phage repressor4e-0858.2
NC_009348:4135002:415400441540044154720717Aeromonas salmonicida subsp. salmonicida A449, complete genomeprophage transcriptional regulator3e-0858.2
NC_007963:1552761:156075215607521561435684Chromohalobacter salexigens DSM 3043, complete genomeputative phage repressor4e-0857.8
NC_015388:1020747:102332010233201024096777Desulfobacca acetoxidans DSM 11109 chromosome, complete genomeputative phage repressor5e-0857.8
NC_010002:4508467:451639745163974517047651Delftia acidovorans SPH-1, complete genomeputative phage repressor7e-0857.4
NC_015379:4691868:469213346921334692831699Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Putative phage regulatory protein8e-0857
NC_015422:2858228:292049429204942921060567Alicycliphilus denitrificans K601 chromosome, complete genomeputative phage repressor2e-0755.8
NC_004129:2328491:234971423497142350442729Pseudomonas fluorescens Pf-5, complete genometranscriptional regulator, Cro/CI family6e-0754.3
NC_014836:1052214:105720510572051057861657Desulfurispirillum indicum S5 chromosome, complete genomepeptidase S24/S26A/S26B9e-0753.5
NC_017192:1885457:188920518892051889891687Arcobacter sp. L, complete genomephage repressor protein9e-0753.5
NC_014972:2798670:281793528179352818681747Desulfobulbus propionicus DSM 2032 chromosome, complete genomeputative phage repressor8e-0753.5
NC_009778:1556222:156473615647361565341606Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein1e-0653.1
NC_008752:3955327:395989139598913960568678Acidovorax avenae subsp. citrulli AAC00-1, complete genomeputative phage repressor3e-0651.6
NC_008609:251608:267950267950268657708Pelobacter propionicus DSM 2379, complete genomeputative phage repressor5e-0651.2
NC_011989:2549252:255180625518062552465660Agrobacterium vitis S4 chromosome 1, complete sequencetranscriptional regulator1e-0550.1