Pre_GI: BLASTP Hits

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Query: NC_013941:3300000:3320630 Escherichia coli O55:H7 str. CB9615 chromosome, complete genome

Start: 3320630, End: 3320818, Length: 189

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The E. coli O55:H7 strain CB9615 was isolated from an infant with diarrhea in Germany in 2003 and confirmed to belong to the same sequence type (ST11) as the O157:H7 clone by multilocus sequence typing. The O55:H7 and O157:H7 E. coli clones have been shown to be closely related. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012917:1840172:1878205187820518794341230Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeintegrase family protein4e-1683.6
NC_016816:1545354:1571573157157315728051233Pantoea ananatis LMG 5342, complete genomesite-specific recombinase, phage integrase family2e-1477.8
NC_014500:2019113:2046545204654520477951251Dickeya dadantii 3937 chromosome, complete genomePhage integrase1e-1168.2
NC_012880:2778795:2778795277879527800451251Dickeya dadantii Ech703, complete genomeintegrase family protein1e-1168.2
NC_015379:908904:9688839688839701391257Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Putative integrase1e-1065.5
NC_012880:3748665:3775059377505937763001242Dickeya dadantii Ech703, complete genomeintegrase family protein1e-1065.5
AC_000091:2747520:2754815275481527560561242Escherichia coli W3110 DNA, complete genomeintegrase2e-1064.3
NC_000913:2746886:2754181275418127554221242Escherichia coli K12, complete genomeCP4-57 prophage; integrase2e-1064.3
NC_012759:2633949:2639993263999326412341242Escherichia coli BW2952 chromosome, complete genomeintegrase2e-1064.3
NC_002505:514732:5487805487805500211242Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completephage integrase2e-1064.3
NC_012668:62500:7031970319715601242Vibrio cholerae MJ-1236 chromosome 1, complete sequencephage integrase2e-1064.3
NC_016445:2938887:2959816295981629610571242Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completephage integrase2e-1064.3
CU928145:2973968:2979298297929829805391242Escherichia coli 55989 chromosome, complete genomeintegrase; CP4-57 prophage3e-1063.9
NC_011748:2973968:2979298297929829805391242Escherichia coli 55989, complete genomeintegrase3e-1063.9
NC_010322:5293652:5298977529897753002331257Pseudomonas putida GB-1 chromosome, complete genomeintegrase family protein4e-1063.5
NC_002505:1892430:1896092189609218973271236Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completeintegrase, phage family3e-1063.5
NC_009457:1444449:1449205144920514504401236Vibrio cholerae O395 chromosome 2, complete sequencephage family integrase3e-1063.5
NC_012578:1838470:1843226184322618444611236Vibrio cholerae M66-2 chromosome I, complete sequenceintegrase, phage family3e-1063.5
NC_012582:1976962:1980624198062419818591236Vibrio cholerae O395 chromosome chromosome I, complete sequenceintegrase, phage family3e-1063.5
NC_016445:1363831:1367493136749313687281236Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completephage family integrase3e-1063.5
NC_016944:1937645:1942401194240119436361236Vibrio cholerae IEC224 chromosome I, complete sequencephage family integrase3e-1063.5
NC_017986:1885613:1900835190083519020911257Pseudomonas putida ND6 chromosome, complete genomephage integrase family protein4e-1063.2
NC_016612:28451:3273032730339711242Klebsiella oxytoca KCTC 1686 chromosome, complete genomeintegrase5e-1063.2
NC_009092:1441813:1465559146555914667881230Shewanella loihica PV-4, complete genomephage integrase family protein7e-1062.8
NC_014500:842493:8582948582948595321239Dickeya dadantii 3937 chromosome, complete genomePhage integrase8e-1062.4
NC_017270:1755552:1760299176029917615671269Vibrio cholerae LMA3984-4 chromosome chromosome I, completePhage integrase8e-1062.4
NC_020181:5130513:5157669515766951589101242Enterobacter aerogenes EA1509E, complete genomeProphage CP4-57 integrase9e-1062.4
NC_020064:3609844:3617299361729936185401242Serratia marcescens FGI94, complete genomeIntegrase1e-0962
NC_010634:1342393:1355589135558913568301242Yersinia pseudotuberculosis PB1/+, complete genomeintegrase family protein1e-0962
NC_017328:2785309:2793582279358227948231242Shigella flexneri 2002017 chromosome, complete genomeputative CP4-57-type integrase2e-0961.2
NC_004337:2747917:2754700275470027559411242Shigella flexneri 2a str. 301, complete genomeputative CP4-57-type integrase2e-0961.2
NC_008258:2905413:2913326291332629145491224Shigella flexneri 5 str. 8401, complete genomeprophage CP4-57 integrase2e-0961.2
NC_004741:2741971:2749333274933327505741242Shigella flexneri 2a str. 2457T, complete genomeputative CP4-57-type integrase2e-0961.2
NC_013456:2984491:2985576298557629868231248Vibrio sp. Ex25 chromosome 1, complete genomephage integrase2e-0960.8
NC_007912:3466966:3472237347223734734901254Saccharophagus degradans 2-40, complete genomephage integrase3e-0960.5
NC_020260:603796:6373456373456385861242Cronobacter sakazakii Sp291, complete genomeintegrase3e-0960.5
NC_007492:857428:8773888773888786441257Pseudomonas fluorescens PfO-1, complete genomePhage integrase4e-0960.1
NC_009457:351512:4035974035974048651269Vibrio cholerae O395 chromosome 2, complete sequencephage family integrase5e-0960.1
NC_011080:2870428:2878326287832628795191194Salmonella enterica subsp. enterica serovar Newport str. SL254,phage integrase family protein1e-0858.9
NC_012691:2476223:2484079248407924853261248Tolumonas auensis DSM 9187, complete genomeintegrase family protein1e-0858.2
NC_004603:1115134:1127706112770611289441239Vibrio parahaemolyticus RIMD 2210633 chromosome I, completeintegrase, phage family2e-0857.8
NC_020209:3874844:3880916388091638821751260Pseudomonas poae RE*1-1-14, complete genomeintegrase family protein2e-0857.8
NC_009436:3367194:3375316337531633765031188Enterobacter sp. 638, complete genomephage integrase family protein2e-0857.4
NC_016944:1937645:194377419437741944187414Vibrio cholerae IEC224 chromosome I, complete sequencephage integrase5e-0856.6
NC_002505:1892430:189740218974021897878477Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete5e-0856.6
NC_009457:1444449:145051514505151450991477Vibrio cholerae O395 chromosome 2, complete sequenceintegrase, truncation5e-0856.6
NC_012578:1838470:184453618445361845012477Vibrio cholerae M66-2 chromosome I, complete sequence5e-0856.6
NC_012582:1976962:198193419819341982410477Vibrio cholerae O395 chromosome chromosome I, complete sequence5e-0856.6
NC_016445:1363831:136882413688241369279456Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completephage integrase5e-0856.6
NC_010102:2862178:2868695286869528698911197Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein7e-0855.8
NC_012917:833721:8440428440428452501209Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeintegrase family protein1e-0755.5
NC_021066:5342127:5364388536438853656081221Raoultella ornithinolytica B6, complete genomehypothetical protein1e-0755.5
NC_013508:2870954:2877923287792328791191197Edwardsiella tarda EIB202, complete genomeputative integrase1e-0755.5
NC_016857:2871689:2890073289007328912691197Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74site-specific recombinase, phage integrase family2e-0754.7
NC_016810:2871689:2890073289007328912691197Salmonella enterica subsp. enterica serovar Typhimurium strbacteriophage integrase2e-0754.7
NC_008577:2115440:2118970211897021202051236Shewanella sp. ANA-3 chromosome 1, complete sequencephage integrase family protein2e-0754.7
NC_008321:1993541:1999986199998620012211236Shewanella sp. MR-4, complete genomephage integrase family protein2e-0754.7
NC_004547:913553:9255419255419268211281Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeprophage integrase4e-0753.5
NC_008322:2077628:2081154208115420823891236Shewanella sp. MR-7, complete genomephage integrase family protein6e-0752.8
NC_009648:3224495:3231820323182032330671248Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative integrase1e-0651.6
NC_011751:3048490:3049026304902630502731248Escherichia coli UMN026 chromosome, complete genomeprophage CP4-57 integrase2e-0651.6
NC_011740:448000:4580014580014592001200Escherichia fergusonii ATCC 35469, complete genomephage integrase2e-0651.2
NC_010465:3431500:3443988344398834451961209Yersinia pseudotuberculosis YPIII, complete genomeintegrase family protein2e-0650.8
NC_010159:1417993:1427636142763614288351200Yersinia pestis Angola, complete genomeprophage CP4-57 integrase5e-0649.7
NC_008150:650899:6602206602206614191200Yersinia pestis Antiqua, complete genomeputative prophage integrase5e-0649.7
NC_008149:3251196:3259191325919132603901200Yersinia pestis Nepal516, complete genomeprophage integrase5e-0649.7
NC_005810:1130251:1138213113821311394451233Yersinia pestis biovar Microtus str. 91001, complete genomeprophage CP4-57 integrase6e-0649.7
NC_004088:3382148:3390110339011033913421233Yersinia pestis KIM, complete genomeprophage CP4-57 integrase6e-0649.7
NC_003143:1233128:1243484124348412446831200Yersinia pestis CO92, complete genomeputative prophage integrase5e-0649.7
NC_009381:2939782:2947777294777729489761200Yersinia pestis Pestoides F chromosome, complete genomeprophage integrase5e-0649.7
NC_014029:1283500:1292681129268112938801200Yersinia pestis Z176003 chromosome, complete genomeputative prophage integrase5e-0649.7
NC_017154:1225500:1234774123477412359731200Yersinia pestis D106004 chromosome, complete genomeputative prophage integrase5e-0649.7
NC_017160:1507500:1515638151563815168371200Yersinia pestis D182038 chromosome, complete genomeputative prophage integrase5e-0649.7
NC_017168:4155143:4165500416550041666991200Yersinia pestis A1122 chromosome, complete genomeputative prophage integrase5e-0649.7
NC_017265:1136000:1144814114481411460131200Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,putative prophage integrase5e-0649.7
NC_015224:3587500:3594873359487335961561284Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,putative prophage integrase6e-0649.3