Pre_GI: BLASTP Hits

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Query: NC_013941:1613595:1622647 Escherichia coli O55:H7 str. CB9615 chromosome, complete genome

Start: 1622647, End: 1623387, Length: 741

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The E. coli O55:H7 strain CB9615 was isolated from an infant with diarrhea in Germany in 2003 and confirmed to belong to the same sequence type (ST11) as the O157:H7 clone by multilocus sequence typing. The O55:H7 and O157:H7 E. coli clones have been shown to be closely related. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011353:1716037:172511817251181725858741Escherichia coli O157:H7 str. EC4115 chromosome, complete genome7e-142503
NC_002655:2264773:228294922829492283650702Escherichia coli O157:H7 EDL933, complete genomeputative integrase fragment9e-134476
NC_011601:1466496:147555814755581476250693Escherichia coli O127:H6 str. E2348/69 chromosome, complete genome3e-133474
NC_002695:1794635:180352718035271804219693Escherichia coli O157:H7 str. Sakai, complete genomeintegrase2e-132471
NC_013008:1715831:172409317240931724785693Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeintegrase2e-132471
NC_013361:1754346:176509417650941765786693Escherichia coli O26:H11 str. 11368 chromosome, complete genome2e-132471
NC_013364:2898964:2916736291673629178061071Escherichia coli O111:H- str. 11128, complete genomeputative integrase2e-126451
NC_011601:1039500:1043517104351710445901074Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeintegrase7e-126449
NC_013941:975353:9807899807899818591071Escherichia coli O55:H7 str. CB9615 chromosome, complete genomephage integrase family2e-101369
NC_012967:786534:7879527879527890221071Escherichia coli B str. REL606 chromosome, complete genomeintegrase2e-101369
NC_011601:717072:7208917208917219611071Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeintegrase3e-101367
NC_012947:3015985:302838230283823029305924Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completelambda integrase6e-76283
NC_013364:1997891:201108120110812011473393Escherichia coli O111:H- str. 11128, complete genome2e-68258
NC_007712:1516589:1520735152073515218021068Sodalis glossinidius str. 'morsitans', complete genomephage integrase2e-55216
NC_010102:1137247:114318211431821144009828Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-54212
NC_011080:1944226:1972465197246519735441080Salmonella enterica subsp. enterica serovar Newport str. SL254,phage integrase5e-54211
NC_010102:1137247:1149438114943811505171080Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein3e-54211
NC_011083:1993672:201608920160892016943855Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,integrase3e-54211
NC_016860:1943203:196260919626091963463855Salmonella enterica subsp. enterica serovar Typhimurium strintegrase3e-54211
NC_003197:1945858:196702619670261967922897Salmonella typhimurium LT2, complete genome3e-54211
NC_016810:1903426:192459419245941925490897Salmonella enterica subsp. enterica serovar Typhimurium strIntegrase3e-54211
NC_016856:1957263:197843119784311979327897Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sintegrase3e-54211
NC_016857:1903426:192459419245941925490897Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative phage integrase protein3e-54211
NC_016863:1905454:192662219266221927518897Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative phage integrase protein3e-54211
NC_017046:1902788:192395719239571924853897Salmonella enterica subsp. enterica serovar Typhimurium str. 798Integrase3e-54211
NC_011294:1220526:1226471122647112275501080Salmonella enterica subsp. enterica serovar Enteritidis strintegrase8e-54210
NC_011205:1391971:1399187139918714002661080Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853integrase1e-53209
NC_011205:1345511:1351456135145613525351080Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853phage integrase2e-53208
NC_011094:1923870:1945403194540319464821080Salmonella enterica subsp. enterica serovar Schwarzengrund strphage integrase3e-52205
NC_008258:1873805:1886389188638918874651077Shigella flexneri 5 str. 8401, complete genomeputative phage integrase protein4e-51201
NC_003198:1908238:1932482193248219335581077Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative integrase3e-51201
NC_017060:59500:1055351055351066591125Rahnella aquatilis HX2 plasmid PRA1, complete sequencelambda integrase2e-48192
NC_015062:99969:1087051087051098291125Rahnella sp. Y9602 plasmid pRAHAQ01, complete sequencelambda integrase2e-48192
NC_013850:1887556:1893425189342518945101086Klebsiella variicola At-22 chromosome, complete genomelambda integrase8e-48190
NC_012731:2083650:2089612208961220907541143Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeprophage lambda integrase1e-46186
NC_014562:983398:9899719899719911161146Pantoea vagans C9-1 chromosome, complete genomeIntegrase8e-46183
NC_008563:1175035:1178855117885511799971143Escherichia coli APEC O1, complete genomeprophage lambda integrase3e-45182
NC_007946:1239278:1241467124146712426091143Escherichia coli UTI89, complete genomeprophage lambda integrase3e-45182
NC_011742:1177946:1182443118244311835851143Escherichia coli S88 chromosome, complete genomephage integrase3e-45182
NC_012125:1897611:190354519035451904273729Salmonella enterica subsp. enterica serovar Paratyphi C strainphage integrase protein2e-45182
NC_011751:1405381:1411252141125214123941143Escherichia coli UMN026 chromosome, complete genomephage integrase2e-45182
NC_009801:1392696:1417903141790314190331131Escherichia coli E24377A, complete genomesite-specific recombinase, phage integrase family2e-44179
NC_011353:1716037:1737316173731617384461131Escherichia coli O157:H7 str. EC4115 chromosome, complete genomesite-specific recombinase, phage integrase family2e-44179
NC_013008:1715831:1736291173629117374211131Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeintegrase for prophage CP-933O2e-44179
NC_014838:218000:2249612249612261031143Pantoea sp. At-9b plasmid pPAT9B01, complete sequencelambda integrase2e-44179
NC_011748:1408280:1408280140828014094101131Escherichia coli 55989, complete genomephage integrase2e-44179
CU928145:1408280:1408280140828014094101131Escherichia coli 55989 chromosome, complete genomephage integrase2e-44179
NC_013364:1997891:1998117199811719992471131Escherichia coli O111:H- str. 11128, complete genomeputative integrase1e-44179
NC_007712:2897000:2906392290639229075161125Sodalis glossinidius str. 'morsitans', complete genomephage integrase1e-43176
NC_016612:3803130:3809103380910338102301128Klebsiella oxytoca KCTC 1686 chromosome, complete genomesite-specific recombinase, phage integrase family protein6e-43174
NC_011283:2836000:2907727290772729088661140Klebsiella pneumoniae 342 chromosome, complete genomephage integrase family site-specific recombinase1e-42172
NC_013282:1804909:1812665181266518138131149Cronobacter turicensis, complete genomeProphage lambda integrase5e-42171
NC_000913:1188999:1198902119890212000291128Escherichia coli K12, complete genomee14 prophage; predicted integrase2e-41169
AC_000091:1191353:1201256120125612023831128Escherichia coli W3110 DNA, complete genomepredicted integrase2e-41169
NC_009832:2211154:222325822232582224040783Serratia proteamaculans 568, complete genomeintegrase family protein3e-41168
NC_012779:1966205:1973860197386019749541095Edwardsiella ictaluri 93-146, complete genomeintegrase2e-40166
NC_013508:1687432:1700197170019717012911095Edwardsiella tarda EIB202, complete genomeputative phage integrase protein1e-40166
NC_011770:1431740:1433854143385414349571104Pseudomonas aeruginosa LESB58, complete genomephage integrase, putative4e-38157
NC_011080:1944226:195729619572961957808513Salmonella enterica subsp. enterica serovar Newport str. SL254,4e-34144
NC_006511:1063249:106919410691941070035842Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC1e-33143
NC_016831:1690811:171376217137621714373612Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein2e-33142
NC_007650:1192310:1197986119798611991131128Burkholderia thailandensis E264 chromosome II, complete sequenceintegrase-like protein3e-31135
NC_012791:2590500:2590574259057425916621089Variovorax paradoxus S110 chromosome 1, complete genomeintegrase family protein1e-30133
NC_013422:1755875:1797967179796717991241158Halothiobacillus neapolitanus c2, complete genomelambda integrase2e-30132
NC_011740:1831845:184836618483661848854489Escherichia fergusonii ATCC 35469, complete genome7e-30130
NC_020418:2910593:291768229176822918563882Morganella morganii subsp. morganii KT, complete genomePhage integrase5e-29127
NC_007712:1791766:179714417971441797914771Sodalis glossinidius str. 'morsitans', complete genomeputative phage integrase4e-24111
NC_007974:1007834:102021810202181020673456Ralstonia metallidurans CH34 chromosome 2, complete sequencephage integrase1e-20100
NC_012947:3015985:303373730337373033898162Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, complete2e-1892.8
NC_011770:2499432:2540392254039225415041113Pseudomonas aeruginosa LESB58, complete genomephage integrase, putative2e-1892.4
NC_006511:1063249:108395010839501084318369Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative cytoplasmic protein7e-1890.9
NC_011147:1057259:107796010779601078328369Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein7e-1890.9
NC_011083:1993672:200564220056422006010369Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,putative cytoplasmic protein6e-1890.9
NC_003197:1945858:195783519578351958203369Salmonella typhimurium LT2, complete genome6e-1890.9
NC_011080:1944226:196285119628511963219369Salmonella enterica subsp. enterica serovar Newport str. SL254,putative cytoplasmic protein6e-1890.9
NC_016810:1903426:191540319154031915771369Salmonella enterica subsp. enterica serovar Typhimurium str6e-1890.9
NC_016860:1943203:195518019551801955548369Salmonella enterica subsp. enterica serovar Typhimurium strputative cytoplasmic protein6e-1890.9
NC_016863:1905454:191743119174311917799369Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative cytoplasmic protein6e-1890.9
NC_006905:1961774:197374719737471974115369Salmonella enterica subsp. enterica serovar Choleraesuis strputative cytoplasmic protein1e-1686.7
NC_020418:2868000:287747828774782877876399Morganella morganii subsp. morganii KT, complete genomePhage integrase8e-1684
NC_017506:2089769:2107666210766621087871122Marinobacter adhaerens HP15 chromosome, complete genomeprophage lambda integrase5e-1581.3
NC_011149:1236689:123668912366891237048360Salmonella enterica subsp. enterica serovar Agona str. SL483,integrase5e-1581.3
NC_006511:1063249:107544410754441075773330Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative phage integrase protein9e-1580.9
NC_011147:1057259:106945410694541069783330Salmonella enterica subsp. enterica serovar Paratyphi A str9e-1580.9
NC_012125:1897611:190945919094591909728270Salmonella enterica subsp. enterica serovar Paratyphi C strainphage integrase protein6e-1478.2
NC_011205:2180598:218594621859462186935990Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853integrase protein6e-1477.8
NC_011294:2053991:205795920579592058948990Salmonella enterica subsp. enterica serovar Enteritidis strphage integrase7e-1477.8
NC_017046:1902788:191480419148041915133330Salmonella enterica subsp. enterica serovar Typhimurium str. 7989e-1477.4
NC_016857:1903426:191544219154421915771330Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative cytoplasmic protein9e-1477.4
NC_016856:1957263:196927919692791969608330Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein9e-1477.4
NC_017033:1052000:1053148105314810541671020Frateuria aurantia DSM 6220 chromosome, complete genomesite-specific recombinase XerC1e-1376.6
NC_010508:451184:461527461527462063537Burkholderia cenocepacia MC0-3 chromosome 1, complete sequence2e-1272.8
NC_012125:1897611:191861119186111918940330Salmonella enterica subsp. enterica serovar Paratyphi C straincytoplasmic protein2e-1272.8
NC_016832:1090274:109188310918831092152270Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Phage integrase7e-1270.9
NC_007645:4677965:469104446910444691523480Hahella chejuensis KCTC 2396, complete genomeIntegrase2e-1169.7
NC_004631:1091303:109293910929391093139201Salmonella enterica subsp. enterica serovar Typhi Ty2, complete7e-1167.8
NC_003198:1867456:188799318879931888193201Salmonella enterica subsp. enterica serovar Typhi str. CT18,7e-1167.8
NC_016831:1690811:171438817143881714657270Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein2e-1066.6
NC_015379:4691868:470798047079804708960981Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative integrase2e-1066.2
NC_012724:359444:3687393687393697581020Burkholderia glumae BGR1 chromosome 1, complete genomePhage-related integrase3e-1065.9
NC_012660:3689223:370301937030193703990972Pseudomonas fluorescens SBW25 chromosome, complete genomeintegrase (pseudogene)8e-1064.3
NC_015566:3659318:3669051366905136702291179Serratia sp. AS12 chromosome, complete genomehypothetical protein1e-0963.5
NC_011283:1307173:1309011130901113102611251Klebsiella pneumoniae 342 chromosome, complete genomephage integrase family site-specific recombinase2e-0962.8
NC_014722:846084:8501788501788513681191Burkholderia rhizoxinica HKI 454, complete genomehypothetical protein2e-0962.8
NC_012724:359444:3783543783543793821029Burkholderia glumae BGR1 chromosome 1, complete genomePhage integrase:Phage integrase, N-terminal SAM-like protein1e-0860.1
NC_007005:3414579:3419554341955434205881035Pseudomonas syringae pv. syringae B728a, complete genomePhage integrase:Phage integrase, N-terminal SAM-like1e-0860.1
NC_007712:2028500:2057823205782320588451023Sodalis glossinidius str. 'morsitans', complete genomeputative phage integrase2e-0859.7
NC_007712:1926500:193080019308001931645846Sodalis glossinidius str. 'morsitans', complete genomeputative phage integrase3e-0858.9
NC_007508:2783443:2802474280247428036761203Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomephage-related integrase4e-0858.5
NC_008344:669498:6859576859576871591203Nitrosomonas eutropha C91, complete genomephage integrase family protein4e-0858.5
NC_004741:2593012:2612492261249226136941203Shigella flexneri 2a str. 2457T, complete genomeputative integrase4e-0858.5
NC_008344:2374761:2378101237810123793031203Nitrosomonas eutropha C91, complete genomephage integrase family protein4e-0858.5
NC_016602:3122700:3133060313306031342471188Vibrio furnissii NCTC 11218 chromosome 1, complete sequencephage integrase family protein5e-0858.2
NC_015633:2801321:2823882282388228250841203Vibrio anguillarum 775 chromosome chromosome I, complete sequenceDNA integration/recombination/inversion protein7e-0857.8
NC_008463:1293079:1301126130112613023281203Pseudomonas aeruginosa UCBPP-PA14, complete genomeputative integrase9e-0857.4
NC_010793:1811401:1846220184622018473381119Orientia tsutsugamushi str. Ikeda, complete genomeputative integrase1e-0757
NC_010793:30488:468754687547690816Orientia tsutsugamushi str. Ikeda, complete genomeputative integrase1e-0757
NC_009488:1249492:126651512665151267378864Orientia tsutsugamushi str. Boryong, complete genome2e-0756.6
NC_009488:57889:608196081961682864Orientia tsutsugamushi str. Boryong, complete genome2e-0756.6
NC_011770:2690501:2690501269050126915261026Pseudomonas aeruginosa LESB58, complete genomesite-specific recombinase, phage integrase family1e-0756.6
NC_013861:728648:7416787416787429101233Legionella longbeachae NSW150, complete genomephage-related integrase2e-0756.2
NC_007712:1712667:171266717126671713602936Sodalis glossinidius str. 'morsitans', complete genomeputative phage integrase2e-0756.2
NC_014355:1223243:1233478123347812345481071Candidatus Nitrospira defluvii, complete genomeputative integrase2e-0756.2
NC_009488:1165927:1178998117899811802421245Orientia tsutsugamushi str. Boryong, complete genomephage-related integrase3e-0755.8
NC_009488:1465781:1470586147058614718301245Orientia tsutsugamushi str. Boryong, complete genomephage-related integrase3e-0755.8
NC_009488:1952640:1956004195600419572481245Orientia tsutsugamushi str. Boryong, complete genomephage-related integrase3e-0755.8
NC_009488:803873:8177908177908190341245Orientia tsutsugamushi str. Boryong, complete genomephage-related integrase3e-0755.8
NC_009488:903000:9140619140619153051245Orientia tsutsugamushi str. Boryong, complete genomephage-related integrase3e-0755.8
NC_009488:1673756:1676815167681516780591245Orientia tsutsugamushi str. Boryong, complete genomephage-related integrase3e-0755.8
NC_009488:1917000:1918697191869719199411245Orientia tsutsugamushi str. Boryong, complete genomephage-related integrase3e-0755.8
NC_013456:3011518:3030104303010430313001197Vibrio sp. Ex25 chromosome 1, complete genomeintegrase5e-0755.1
NC_012721:1052883:105740610574061057858453Burkholderia glumae BGR1 chromosome 2, complete genomePhage integrase family protein5e-0755.1
NC_006155:2116834:2128303212830321293251023Yersinia pseudotuberculosis IP 32953, complete genomeputative integrase5e-0755.1
NC_016026:2082500:2095118209511820962931176Micavibrio aeruginosavorus ARL-13 chromosome, complete genomephage integrase family protein5e-0755.1
NC_015733:1179977:1183392118339211846211230Pseudomonas putida S16 chromosome, complete genomeputative phage-related integrase protein5e-0754.7
NC_016745:2028424:2035828203582820370151188Oceanimonas sp. GK1 chromosome, complete genomephage integrase family protein5e-0754.7
NC_009800:2651730:2667104266710426682911188Escherichia coli HS, complete genomesite-specific recombinase, phage integrase family6e-0754.7
NC_008009:1408000:1411109141110914124731365Acidobacteria bacterium Ellin345, complete genomephage integrase6e-0754.7
NC_010501:4379920:4392912439291243939341023Pseudomonas putida W619, complete genomeintegrase family protein9e-0754.3
NC_015186:1126830:1130897113089711321111215Acidiphilium multivorum AIU301, complete genomephage integrase family protein9e-0753.9
NC_008043:615049:636897636897637490594Silicibacter sp. TM1040 mega plasmid, complete sequencephage integrase1e-0653.9
NC_015064:2341152:2360406236040623614641059Acidobacterium sp. MP5ACTX9 chromosome, complete genomeintegrase family protein1e-0653.9
NC_013508:1687432:169951816995181699856339Edwardsiella tarda EIB202, complete genomeputative phage integrase protein2e-0653.1
NC_011770:860944:8639658639658650141050Pseudomonas aeruginosa LESB58, complete genomeIntegrase2e-0653.1
NC_015388:1020747:102930310293031030148846Desulfobacca acetoxidans DSM 11109 chromosome, complete genomeintegrase family protein2e-0652.8
NC_014355:243543:2579012579012590221122Candidatus Nitrospira defluvii, complete genomephage integrase2e-0652.8
NC_013194:634039:645740645740646480741Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completeintegrase family protein4e-0652
NC_017030:8599515:8613843861384386150331191Corallococcus coralloides DSM 2259 chromosome, complete genomephage integrase family site specific recombinase6e-0651.2
NC_009485:7021228:7029039702903970301871149Bradyrhizobium sp. BTAi1 chromosome, complete genomephage integrase7e-0651.2