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Query: NC_013929:8525000 Streptomyces scabiei 87.22 chromosome, complete genome

Start: 8525000, End: 8542599, Length: 17600

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_009480:996409964013380134162Clavibacter michiganensis subsp. michiganensis NCPPB 382, complete6e-87329BLASTN svgBLASTP svg
NC_013521:94049594049596409923605Sanguibacter keddieii DSM 10542, complete genome6e-1383.8BLASTN svgBLASTP svg
NC_019673:27333272733327275459921273Saccharothrix espanaensis DSM 44229 complete genome3e-0867.9BLASTN svgBLASTP svg
NC_011886:40466140466142708122421Arthrobacter chlorophenolicus A6, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_010407:151599*15159917558923991Clavibacter michiganensis subsp. sepedonicus chromosome, complete1e-0765.9BLASTN svgBLASTP svg
NC_015953:58657335865733590682141089Streptomyces sp. SirexAA-E chromosome, complete genome5e-0763.9BLASTN svgBLASTP svg
NC_013947:65858476585847662674840902Stackebrandtia nassauensis DSM 44728 chromosome, complete genome8e-0660BLASTN svgBLASTP svg
NC_009142:60860006086000610482618827Saccharopolyspora erythraea NRRL 2338, complete genome8e-0660BLASTN svgBLASTP svg