Pre_GI: BLASTN Hits

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Query: NC_013929:5850599 Streptomyces scabiei 87.22 chromosome, complete genome

Start: 5850599, End: 5870588, Length: 19990

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_018750:82105008210500823849928000Streptomyces venezuelae ATCC 10712, complete genome0749BLASTN svgBLASTP svg
NC_003155:210240*21024026219151952Streptomyces avermitilis MA-4680, complete genome7e-133482BLASTN svgBLASTP svg
NC_015953:34565353456535350619749663Streptomyces sp. SirexAA-E chromosome, complete genome6e-87329BLASTN svgBLASTP svg
NC_006087:14256821425682144554519864Leifsonia xyli subsp. xyli str. CTCB07, complete genome2e-65258BLASTN svgBLASTP svg
NC_013235:3812838*3812838384142328586Nakamurella multipartita DSM 44233, complete genome8e-65256BLASTN svgBLASTP svg
NC_013235:2257899*2257899229859940701Nakamurella multipartita DSM 44233, complete genome8e-65256BLASTN svgBLASTP svg
NC_014158:23373323373332771193979Tsukamurella paurometabola DSM 20162 chromosome, complete genome1e-63252BLASTN svgBLASTP svg
NC_018750:52938295293829531859924771Streptomyces venezuelae ATCC 10712, complete genome1e-57232BLASTN svgBLASTP svg
NC_015957:49635004963500498135217853Streptomyces violaceusniger Tu 4113 chromosome, complete genome4e-39170BLASTN svgBLASTP svg
NC_018750:77050077050079437823879Streptomyces venezuelae ATCC 10712, complete genome2e-37165BLASTN svgBLASTP svg
NC_008541:47264347264349960526963Arthrobacter sp. FB24 chromosome 1, complete sequence8e-34153BLASTN svgBLASTP svg
NC_006087:22927912292791231485822068Leifsonia xyli subsp. xyli str. CTCB07, complete genome8e-31143BLASTN svgBLASTP svg
NC_018681:867230*86723090173034501Nocardia brasiliensis ATCC 700358 chromosome, complete genome2e-28135BLASTN svgBLASTP svg
NC_009142:827912*82791284912621215Saccharopolyspora erythraea NRRL 2338, complete genome2e-28135BLASTN svgBLASTP svg
NC_013595:9547254*9547254957863931386Streptosporangium roseum DSM 43021, complete genome2e-25125BLASTN svgBLASTP svg
NC_002944:865425*86542589916033736Mycobacterium avium subsp. paratuberculosis K-10, complete genome7e-25123BLASTN svgBLASTP svg
NC_010612:5626259*5626259564509918841Mycobacterium marinum M, complete genome3e-24121BLASTN svgBLASTP svg
NC_011896:2502000*2502000252187519876Mycobacterium leprae Br4923, complete genome4e-20107BLASTN svgBLASTP svg
NC_002677:2500000*2500000252209922100Mycobacterium leprae TN, complete genome4e-20107BLASTN svgBLASTP svg
NC_008278:61332961332963495421626Frankia alni ACN14a, complete genome7e-19103BLASTN svgBLASTP svg
NC_013159:3554389*3554389357362219234Saccharomonospora viridis DSM 43017, complete genome3e-18101BLASTN svgBLASTP svg
NC_013170:311045*31104535303541991Cryptobacterium curtum DSM 15641, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_014391:621062*62106264468923628Micromonospora aurantiaca ATCC 27029 chromosome, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_014815:841484*84148489809956616Micromonospora sp. L5 chromosome, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_015656:50847675084767510643621670Frankia symbiont of Datisca glomerata chromosome, complete genome4e-1797.6BLASTN svgBLASTP svg
NC_013510:991827*991827101259920773Thermomonospora curvata DSM 43183, complete genome7e-1693.7BLASTN svgBLASTP svg
NC_009921:3098271*3098271316510166831Frankia sp. EAN1pec, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_003155:45920004592000463614444145Streptomyces avermitilis MA-4680, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_013174:2163947*2163947218201918073Jonesia denitrificans DSM 20603, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_019673:8161242*8161242818734226101Saccharothrix espanaensis DSM 44229 complete genome1e-1489.7BLASTN svgBLASTP svg
NC_015671:557720*55772057761419895Cellvibrio gilvus ATCC 13127 chromosome, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_015514:3508022*3508022353507127050Cellulomonas fimi ATCC 484 chromosome, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_014151:856354*85635488191525562Cellulomonas flavigena DSM 20109 chromosome, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_009439:3394174*3394174341925525082Pseudomonas mendocina ymp, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_006361:71494471494473378418841Nocardia farcinica IFM 10152, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_003888:36027533602753362646223710Streptomyces coelicolor A3(2), complete genome2e-1385.7BLASTN svgBLASTP svg
NC_014211:43961143961146090921299Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 plasmid3e-1281.8BLASTN svgBLASTP svg
NC_019673:8581000*8581000860834127342Saccharothrix espanaensis DSM 44229 complete genome3e-1281.8BLASTN svgBLASTP svg
NC_012590:850130*85013087382523696Corynebacterium aurimucosum ATCC 700975, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_021177:3598700*3598700361863819939Streptomyces fulvissimus DSM 40593, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_018750:4311300*4311300432914617847Streptomyces venezuelae ATCC 10712, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_002935:781172*78117280470523534Corynebacterium diphtheriae NCTC 13129, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_007164:511171*51117153769026520Corynebacterium jeikeium K411, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_010545:1781393*1781393180797326581Corynebacterium urealyticum DSM 7109, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_010572:54450815445081548674141661Streptomyces griseus subsp. griseus NBRC 13350, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_010572:83524628352462839090038439Streptomyces griseus subsp. griseus NBRC 13350, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_015673:397947*39794742438426438Corynebacterium resistens DSM 45100 chromosome, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_015683:732668*73266875500922342Corynebacterium ulcerans BR-AD22 chromosome, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_015953:32270003227000325159924600Streptomyces sp. SirexAA-E chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_015410:37010003701000372390022901Pseudomonas mendocina NK-01 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_013171:1364464*1364464138824923786Anaerococcus prevotii DSM 20548, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_013757:90050090050091836917870Geodermatophilus obscurus DSM 43160, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_013729:6217500*6217500623574618247Kribbella flavida DSM 17836, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_009142:78202517820251783911518865Saccharopolyspora erythraea NRRL 2338, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_018750:61326196132619616363731019Streptomyces venezuelae ATCC 10712, complete genome9e-0660BLASTN svgBLASTP svg
NC_013729:3573000*3573000359711224113Kribbella flavida DSM 17836, complete genome9e-0660BLASTN svgBLASTP svg
NC_009921:1813500*1813500184695033451Frankia sp. EAN1pec, complete genome9e-0660BLASTN svgBLASTP svg