Pre_GI: BLASTN Hits

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Query: NC_013929:4807910 Streptomyces scabiei 87.22 chromosome, complete genome

Start: 4807910, End: 4827173, Length: 19264

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_021177:14182131418213144186323651Streptomyces fulvissimus DSM 40593, complete genome01310BLASTN svgBLASTP svg
NC_003155:5443230*5443230546350520276Streptomyces avermitilis MA-4680, complete genome0761BLASTN svgBLASTP svg
NC_018750:37415813741581376849826918Streptomyces venezuelae ATCC 10712, complete genome2e-167597BLASTN svgBLASTP svg
NC_010572:40248104024810404598521176Streptomyces griseus subsp. griseus NBRC 13350, complete genome1e-159571BLASTN svgBLASTP svg
NC_015953:34565353456535350619749663Streptomyces sp. SirexAA-E chromosome, complete genome2e-121444BLASTN svgBLASTP svg
NC_018524:17459491745949178032034372Nocardiopsis alba ATCC BAA-2165 chromosome, complete genome1e-118434BLASTN svgBLASTP svg
NC_015957:19600019600021778021781Streptomyces violaceusniger Tu 4113 chromosome, complete genome1e-100375BLASTN svgBLASTP svg
NC_015953:2349503*2349503238809938597Streptomyces sp. SirexAA-E chromosome, complete genome1e-97365BLASTN svgBLASTP svg
NC_015957:68592596859259687895419696Streptomyces violaceusniger Tu 4113 chromosome, complete genome1e-94355BLASTN svgBLASTP svg
NC_003155:29987329987331809918227Streptomyces avermitilis MA-4680, complete genome7e-93349BLASTN svgBLASTP svg
NC_018750:62378756237875626148023606Streptomyces venezuelae ATCC 10712, complete genome2e-77297BLASTN svgBLASTP svg
NC_013595:89189789189791154419648Streptosporangium roseum DSM 43021, complete genome3e-76293BLASTN svgBLASTP svg
NC_014210:53708685370868538907818211Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,1e-75291BLASTN svgBLASTP svg
NC_014666:300571*30057132924028670Frankia sp. EuI1c chromosome, complete genome2e-68268BLASTN svgBLASTP svg
NC_003888:76596397659639770388744249Streptomyces coelicolor A3(2), complete genome1e-66262BLASTN svgBLASTP svg
NC_013510:262888*26288828309920212Thermomonospora curvata DSM 43183, complete genome2e-65258BLASTN svgBLASTP svg
NC_018750:77050077050079437823879Streptomyces venezuelae ATCC 10712, complete genome2e-56228BLASTN svgBLASTP svg
NC_003888:56225562259004333819Streptomyces coelicolor A3(2), complete genome2e-56228BLASTN svgBLASTP svg
NC_010407:31744703174470319754523076Clavibacter michiganensis subsp. sepedonicus chromosome, complete4e-48200BLASTN svgBLASTP svg
NC_003155:62299362299365432631334Streptomyces avermitilis MA-4680, complete genome4e-42180BLASTN svgBLASTP svg
NC_006087:24392522439252246595526704Leifsonia xyli subsp. xyli str. CTCB07, complete genome1e-20109BLASTN svgBLASTP svg
NC_003155:5163382*5163382518745824077Streptomyces avermitilis MA-4680, complete genome7e-19103BLASTN svgBLASTP svg
NC_014814:48344448344450236518922Mycobacterium sp. Spyr1 chromosome, complete genome3e-18101BLASTN svgBLASTP svg
NC_002944:42540114254011427748823478Mycobacterium avium subsp. paratuberculosis K-10, complete genome6e-1693.7BLASTN svgBLASTP svg
NC_010612:68154468154470456323020Mycobacterium marinum M, complete genome6e-1383.8BLASTN svgBLASTP svg
NC_014659:4299552*4299552434331043759Rhodococcus equi 103S, complete genome2e-1281.8BLASTN svgBLASTP svg
NC_013205:289291*28929131395124661Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,2e-1281.8BLASTN svgBLASTP svg
NC_012522:58959465895946592393127986Rhodococcus opacus B4, complete genome2e-1281.8BLASTN svgBLASTP svg
NC_019673:35591853559185357959920415Saccharothrix espanaensis DSM 44229 complete genome1e-1179.8BLASTN svgBLASTP svg
NC_018704:347948*34794837014822201Amphibacillus xylanus NBRC 15112, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_012673:2368971*2368971238860519635Exiguobacterium sp. AT1b, complete genome9e-0969.9BLASTN svgBLASTP svg
NC_013595:33615053361505338409922595Streptosporangium roseum DSM 43021, complete genome9e-0969.9BLASTN svgBLASTP svg
NC_015975:1493636*1493636151659922964Lactobacillus ruminis ATCC 27782 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_004668:241352*24135226701725666Enterococcus faecalis V583, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_007929:473500*47350049963926140Lactobacillus salivarius subsp. salivarius UCC118, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_009512:30684953068495308873620242Pseudomonas putida F1, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_010172:4185904*4185904422075034847Methylobacterium extorquens PA1, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_013595:9994000*99940001001201918020Streptosporangium roseum DSM 43021, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_003888:46130004613000463146518466Streptomyces coelicolor A3(2), complete genome6e-0763.9BLASTN svgBLASTP svg
NC_006361:2225072*2225072225678031709Nocardia farcinica IFM 10152, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_009922:1917271*1917271193756720297Alkaliphilus oremlandii OhILAs, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_010397:43875004387500440592818429Mycobacterium abscessus chromosome Chromosome, complete sequence6e-0763.9BLASTN svgBLASTP svg
NC_013198:813830*81383083545121622Lactobacillus rhamnosus GG, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_013199:811929*81192983409922171Lactobacillus rhamnosus Lc 705, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_014829:1526401*1526401154452218122Bacillus cellulosilyticus DSM 2522 chromosome, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_006448:5046*50463135826313Streptococcus thermophilus LMG 18311, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_006448:59654*596548486525212Streptococcus thermophilus LMG 18311, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_006449:5046*50463138626341Streptococcus thermophilus CNRZ1066, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_006449:58436*584367815519720Streptococcus thermophilus CNRZ1066, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_008525:664500*66450068827523776Pediococcus pentosaceus ATCC 25745, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_008526:817628*81762883659918972Lactobacillus casei ATCC 334, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_009004:25988259884846022473Lactococcus lactis subsp. cremoris MG1363, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_010999:880878*88087890041319536Lactobacillus casei, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_012793:2122036*2122036214675524720Geobacillus sp. WCH70, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_014334:769205*76920579363824434Lactobacillus casei str. Zhang chromosome, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_014391:1812500*1812500186094748448Micromonospora aurantiaca ATCC 27029 chromosome, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_015760:61345*613458629324949Streptococcus salivarius CCHSS3, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_015760:8914*89142721018297Streptococcus salivarius CCHSS3, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_014246:65180165180167409922299Mobiluncus curtisii ATCC 43063 chromosome, complete genome9e-0660BLASTN svgBLASTP svg
NC_014210:40530944053094407559922506Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,9e-0660BLASTN svgBLASTP svg
NC_011901:3363500*3363500338699623497Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, complete9e-0660BLASTN svgBLASTP svg