Pre_GI: BLASTN Hits

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Query: NC_013929:4614000 Streptomyces scabiei 87.22 chromosome, complete genome

Start: 4614000, End: 4632776, Length: 18777

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015957:51824605182460522128438825Streptomyces violaceusniger Tu 4113 chromosome, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_015957:51099025109902512826818367Streptomyces violaceusniger Tu 4113 chromosome, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_015953:46732467328409937368Streptomyces sp. SirexAA-E chromosome, complete genome6e-1383.8BLASTN svgBLASTP svg
NC_003155:5616000*5616000564050424505Streptomyces avermitilis MA-4680, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_015953:40455004045500406559920100Streptomyces sp. SirexAA-E chromosome, complete genome9e-0969.9BLASTN svgBLASTP svg
NC_015957:73482697348269739671748449Streptomyces violaceusniger Tu 4113 chromosome, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_010572:3878660*3878660390047621817Streptomyces griseus subsp. griseus NBRC 13350, complete genome6e-0763.9BLASTN svgBLASTP svg