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Query: NC_013929:4549988 Streptomyces scabiei 87.22 chromosome, complete genome

Start: 4549988, End: 4588454, Length: 38467

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_014210:32485263248526327306124536Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,1e-49206BLASTN svgBLASTP svg
NC_013729:3573000*3573000359711224113Kribbella flavida DSM 17836, complete genome4e-25125BLASTN svgBLASTP svg
NC_015957:3067919*3067919309418126263Streptomyces violaceusniger Tu 4113 chromosome, complete genome6e-24121BLASTN svgBLASTP svg
NC_015953:32270003227000325159924600Streptomyces sp. SirexAA-E chromosome, complete genome9e-23117BLASTN svgBLASTP svg
NC_013174:1459730*1459730148266422935Jonesia denitrificans DSM 20603, complete genome1e-21113BLASTN svgBLASTP svg
NC_013131:2517861*2517861253698619126Catenulispora acidiphila DSM 44928, complete genome9e-20107BLASTN svgBLASTP svg
NC_013235:3812838*3812838384142328586Nakamurella multipartita DSM 44233, complete genome1e-18103BLASTN svgBLASTP svg
NC_007333:810381*81038185466244282Thermobifida fusca YX, complete genome5e-1591.7BLASTN svgBLASTP svg
NC_003888:38931873893187391788524699Streptomyces coelicolor A3(2), complete genome8e-1487.7BLASTN svgBLASTP svg
NC_014814:3364336*3364336338651822183Mycobacterium sp. Spyr1 chromosome, complete genome8e-1487.7BLASTN svgBLASTP svg
NC_015671:1678088*1678088170223524148Cellvibrio gilvus ATCC 13127 chromosome, complete genome8e-1487.7BLASTN svgBLASTP svg
NC_014318:61086336108633613113322501Amycolatopsis mediterranei U32 chromosome, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_014210:41884484188448421709828651Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,1e-0973.8BLASTN svgBLASTP svg
NC_003903:26079626079628117820383Streptomyces coelicolor A3(2) plasmid SCP1, complete sequence2e-0869.9BLASTN svgBLASTP svg
NC_010572:113201832018Streptomyces griseus subsp. griseus NBRC 13350, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_010572:84939468493946855999966054Streptomyces griseus subsp. griseus NBRC 13350, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_014815:65769836576983660151124529Micromonospora sp. L5 chromosome, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_015635:5222000*5222000524839526396Microlunatus phosphovorus NM-1, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_018524:45998094599809463651236704Nocardiopsis alba ATCC BAA-2165 chromosome, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_015966:2337833*2337833238066842836Rhodothermus marinus SG0.5JP17-172 chromosome, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_010545:1089286*1089286110901519730Corynebacterium urealyticum DSM 7109, complete genome3e-0765.9BLASTN svgBLASTP svg