Query: NC_013929:4549988 Streptomyces scabiei 87.22 chromosome, complete genome
Start: 4549988, End: 4588454, Length: 38467
Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria
General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
---|
NC_014210:3248526 | 3248526 | 3273061 | 24536 | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome, | 1e-49 | 206 | BLASTN svg | BLASTP svg |
NC_013729:3573000* | 3573000 | 3597112 | 24113 | Kribbella flavida DSM 17836, complete genome | 4e-25 | 125 | BLASTN svg | BLASTP svg |
NC_015957:3067919* | 3067919 | 3094181 | 26263 | Streptomyces violaceusniger Tu 4113 chromosome, complete genome | 6e-24 | 121 | BLASTN svg | BLASTP svg |
NC_015953:3227000 | 3227000 | 3251599 | 24600 | Streptomyces sp. SirexAA-E chromosome, complete genome | 9e-23 | 117 | BLASTN svg | BLASTP svg |
NC_013174:1459730* | 1459730 | 1482664 | 22935 | Jonesia denitrificans DSM 20603, complete genome | 1e-21 | 113 | BLASTN svg | BLASTP svg |
NC_013131:2517861* | 2517861 | 2536986 | 19126 | Catenulispora acidiphila DSM 44928, complete genome | 9e-20 | 107 | BLASTN svg | BLASTP svg |
NC_013235:3812838* | 3812838 | 3841423 | 28586 | Nakamurella multipartita DSM 44233, complete genome | 1e-18 | 103 | BLASTN svg | BLASTP svg |
NC_007333:810381* | 810381 | 854662 | 44282 | Thermobifida fusca YX, complete genome | 5e-15 | 91.7 | BLASTN svg | BLASTP svg |
NC_003888:3893187 | 3893187 | 3917885 | 24699 | Streptomyces coelicolor A3(2), complete genome | 8e-14 | 87.7 | BLASTN svg | BLASTP svg |
NC_014814:3364336* | 3364336 | 3386518 | 22183 | Mycobacterium sp. Spyr1 chromosome, complete genome | 8e-14 | 87.7 | BLASTN svg | BLASTP svg |
NC_015671:1678088* | 1678088 | 1702235 | 24148 | Cellvibrio gilvus ATCC 13127 chromosome, complete genome | 8e-14 | 87.7 | BLASTN svg | BLASTP svg |
NC_014318:6108633 | 6108633 | 6131133 | 22501 | Amycolatopsis mediterranei U32 chromosome, complete genome | 3e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_014210:4188448 | 4188448 | 4217098 | 28651 | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome, | 1e-09 | 73.8 | BLASTN svg | BLASTP svg |
NC_003903:260796 | 260796 | 281178 | 20383 | Streptomyces coelicolor A3(2) plasmid SCP1, complete sequence | 2e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_010572:1 | 1 | 32018 | 32018 | Streptomyces griseus subsp. griseus NBRC 13350, complete genome | 2e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_010572:8493946 | 8493946 | 8559999 | 66054 | Streptomyces griseus subsp. griseus NBRC 13350, complete genome | 2e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_014815:6576983 | 6576983 | 6601511 | 24529 | Micromonospora sp. L5 chromosome, complete genome | 2e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_015635:5222000* | 5222000 | 5248395 | 26396 | Microlunatus phosphovorus NM-1, complete genome | 2e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_018524:4599809 | 4599809 | 4636512 | 36704 | Nocardiopsis alba ATCC BAA-2165 chromosome, complete genome | 3e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_015966:2337833* | 2337833 | 2380668 | 42836 | Rhodothermus marinus SG0.5JP17-172 chromosome, complete genome | 3e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_010545:1089286* | 1089286 | 1109015 | 19730 | Corynebacterium urealyticum DSM 7109, complete genome | 3e-07 | 65.9 | BLASTN svg | BLASTP svg |