Pre_GI: BLASTN Hits

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Query: NC_013929:1611940 Streptomyces scabiei 87.22 chromosome, complete genome

Start: 1611940, End: 1663627, Length: 51688

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_013093:21322842132284215260320320Actinosynnema mirum DSM 43827, complete genome4e-0765.9BLASTN svgBLASTP svg
NC_008278:74477774477776316518389Frankia alni ACN14a, complete genome1e-1387.7BLASTN svgBLASTP svg
NC_009921:3551036*3551036362235971324Frankia sp. EAN1pec, complete genome2e-0973.8BLASTN svgBLASTP svg
NC_009921:38549693854969389148136513Frankia sp. EAN1pec, complete genome7e-18101BLASTN svgBLASTP svg
NC_015656:2484749*2484749251548430736Frankia symbiont of Datisca glomerata chromosome, complete genome1e-1697.6BLASTN svgBLASTP svg
NC_009664:1434974*1434974145788622913Kineococcus radiotolerans SRS30216, complete genome2e-1593.7BLASTN svgBLASTP svg
NC_009664:4423829*44238294686013262185Kineococcus radiotolerans SRS30216, complete genome4e-0765.9BLASTN svgBLASTP svg
NC_014391:4672105*4672105470459932495Micromonospora aurantiaca ATCC 27029 chromosome, complete genome1e-0767.9BLASTN svgBLASTP svg
NC_008726:47253894725389475038925001Mycobacterium vanbaalenii PYR-1, complete genome3e-1489.7BLASTN svgBLASTP svg
NC_013235:2257899*2257899229859940701Nakamurella multipartita DSM 44233, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_008699:22943612294361234337849018Nocardioides sp. JS614, complete genome3e-1489.7BLASTN svgBLASTP svg
NC_009142:67295126729512675813128620Saccharopolyspora erythraea NRRL 2338, complete genome4e-1695.6BLASTN svgBLASTP svg
NC_003155:36550036550038509919600Streptomyces avermitilis MA-4680, complete genome9e-39170BLASTN svgBLASTP svg
NC_003155:92149492149494438122888Streptomyces avermitilis MA-4680, complete genome2e-18103BLASTN svgBLASTP svg
NC_003888:38170003817000385464537646Streptomyces coelicolor A3(2), complete genome3e-1179.8BLASTN svgBLASTP svg
NC_003888:21174821174823351821771Streptomyces coelicolor A3(2), complete genome2e-0869.9BLASTN svgBLASTP svg
NC_021177:20347222034722205851023789Streptomyces fulvissimus DSM 40593, complete genome1e-50210BLASTN svgBLASTP svg
NC_015953:62123666212366625841846053Streptomyces sp. SirexAA-E chromosome, complete genome1e-1077.8BLASTN svgBLASTP svg
NC_015957:52259035225903524815322251Streptomyces violaceusniger Tu 4113 chromosome, complete genome5e-34155BLASTN svgBLASTP svg
NC_015957:88452748845274887561630343Streptomyces violaceusniger Tu 4113 chromosome, complete genome2e-21113BLASTN svgBLASTP svg
NC_015957:74084667408466745609947634Streptomyces violaceusniger Tu 4113 chromosome, complete genome2e-21113BLASTN svgBLASTP svg
NC_015957:73482697348269739671748449Streptomyces violaceusniger Tu 4113 chromosome, complete genome2e-21113BLASTN svgBLASTP svg
NC_015957:11513311513313815023018Streptomyces violaceusniger Tu 4113 chromosome, complete genome2e-21113BLASTN svgBLASTP svg
NC_015951:46000460007890132902Streptomyces violaceusniger Tu 4113 plasmid pSTRVI01, complete6e-0971.9BLASTN svgBLASTP svg
NC_013595:19649319649322011923627Streptosporangium roseum DSM 43021, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_013510:517878*51787856251444637Thermomonospora curvata DSM 43183, complete genome2e-0663.9BLASTN svgBLASTP svg