Pre_GI: BLASTN Hits

Some Help

Query: NC_013929:1119384 Streptomyces scabiei 87.22 chromosome, complete genome

Start: 1119384, End: 1158728, Length: 39345

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008278:40239184023918406150737590Frankia alni ACN14a, complete genome2e-23119BLASTN svgBLASTP svg
NC_008699:56500565008084424345Nocardioides sp. JS614, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_019673:63943196394319646135767039Saccharothrix espanaensis DSM 44229 complete genome8e-1487.7BLASTN svgBLASTP svg
NC_019673:6362458*6362458639102228565Saccharothrix espanaensis DSM 44229 complete genome3e-1385.7BLASTN svgBLASTP svg
NC_003155:5163382*5163382518745824077Streptomyces avermitilis MA-4680, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_003155:36550036550038509919600Streptomyces avermitilis MA-4680, complete genome01229BLASTN svgBLASTP svg
NC_003888:7866148*7866148789016824021Streptomyces coelicolor A3(2), complete genome1e-0663.9BLASTN svgBLASTP svg
NC_015957:88452748845274887561630343Streptomyces violaceusniger Tu 4113 chromosome, complete genome5e-157563BLASTN svgBLASTP svg
NC_015957:11513311513313815023018Streptomyces violaceusniger Tu 4113 chromosome, complete genome5e-157563BLASTN svgBLASTP svg
NC_015957:73482697348269739671748449Streptomyces violaceusniger Tu 4113 chromosome, complete genome1e-151545BLASTN svgBLASTP svg
NC_015957:74084667408466745609947634Streptomyces violaceusniger Tu 4113 chromosome, complete genome4e-142513BLASTN svgBLASTP svg
NC_015957:51824605182460522128438825Streptomyces violaceusniger Tu 4113 chromosome, complete genome6e-58234BLASTN svgBLASTP svg