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Query: NC_013929:10950 Streptomyces scabiei 87.22 chromosome, complete genome

Start: 10950, End: 30724, Length: 19775

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_021177:14182131418213144186323651Streptomyces fulvissimus DSM 40593, complete genome01310BLASTN svgBLASTP svg
NC_018524:17459491745949178032034372Nocardiopsis alba ATCC BAA-2165 chromosome, complete genome1e-119438BLASTN svgBLASTP svg
NC_015953:2349503*2349503238809938597Streptomyces sp. SirexAA-E chromosome, complete genome1e-97365BLASTN svgBLASTP svg
NC_015957:68592596859259687895419696Streptomyces violaceusniger Tu 4113 chromosome, complete genome1e-94355BLASTN svgBLASTP svg
NC_003155:29987329987331809918227Streptomyces avermitilis MA-4680, complete genome7e-93349BLASTN svgBLASTP svg
NC_004719:550055002484019341Streptomyces avermitilis MA-4680 plasmid SAP1, complete sequence1e-88335BLASTN svgBLASTP svg
NC_003888:76596397659639770388744249Streptomyces coelicolor A3(2), complete genome1e-66262BLASTN svgBLASTP svg
NC_018750:77050077050079437823879Streptomyces venezuelae ATCC 10712, complete genome2e-56228BLASTN svgBLASTP svg
NC_003888:56225562259004333819Streptomyces coelicolor A3(2), complete genome2e-56228BLASTN svgBLASTP svg
NC_003155:62299362299365432631334Streptomyces avermitilis MA-4680, complete genome4e-42180BLASTN svgBLASTP svg
NC_015957:51824605182460522128438825Streptomyces violaceusniger Tu 4113 chromosome, complete genome1e-35159BLASTN svgBLASTP svg
NC_015957:51099025109902512826818367Streptomyces violaceusniger Tu 4113 chromosome, complete genome1e-35159BLASTN svgBLASTP svg
NC_003155:5163382*5163382518745824077Streptomyces avermitilis MA-4680, complete genome2e-19105BLASTN svgBLASTP svg
NC_019673:35591853559185357959920415Saccharothrix espanaensis DSM 44229 complete genome1e-1179.8BLASTN svgBLASTP svg
NC_013595:89189789189791154419648Streptosporangium roseum DSM 43021, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_021177:11871011871013659917890Streptomyces fulvissimus DSM 40593, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_013595:33615053361505338409922595Streptosporangium roseum DSM 43021, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_006361:2225072*2225072225678031709Nocardia farcinica IFM 10152, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_014391:1812500*1812500186094748448Micromonospora aurantiaca ATCC 27029 chromosome, complete genome2e-0661.9BLASTN svgBLASTP svg