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Query: NC_013929:10109680 Streptomyces scabiei 87.22 chromosome, complete genome

Start: 10109680, End: 10128072, Length: 18393

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015953:62123666212366625841846053Streptomyces sp. SirexAA-E chromosome, complete genome9e-49202BLASTN svgBLASTP svg
NC_015953:33130003313000333519422195Streptomyces sp. SirexAA-E chromosome, complete genome2e-1281.8BLASTN svgBLASTP svg
NC_014815:841484*84148489809956616Micromonospora sp. L5 chromosome, complete genome1e-1075.8BLASTN svgBLASTP svg
NC_008596:2873675*2873675289516021486Mycobacterium smegmatis str. MC2 155, complete genome9e-0969.9BLASTN svgBLASTP svg
NC_008596:51860425186042520471918678Mycobacterium smegmatis str. MC2 155, complete genome9e-0969.9BLASTN svgBLASTP svg
NC_013235:13259751325975134970523731Nakamurella multipartita DSM 44233, complete genome9e-0969.9BLASTN svgBLASTP svg
NC_014814:54229725422972546967946708Mycobacterium sp. Spyr1 chromosome, complete genome3e-0867.9BLASTN svgBLASTP svg
NC_014814:42354774235477428692151445Mycobacterium sp. Spyr1 chromosome, complete genome3e-0867.9BLASTN svgBLASTP svg
NC_015953:46732467328409937368Streptomyces sp. SirexAA-E chromosome, complete genome5e-0763.9BLASTN svgBLASTP svg
NC_008699:56500565008084424345Nocardioides sp. JS614, complete genome5e-0763.9BLASTN svgBLASTP svg
NC_013235:3812838*3812838384142328586Nakamurella multipartita DSM 44233, complete genome9e-0660BLASTN svgBLASTP svg