Pre_GI: BLASTP Hits

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Query: NC_013929:8525000:8538671 Streptomyces scabiei 87.22 chromosome, complete genome

Start: 8538671, End: 8539318, Length: 648

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009480:99640:128542128542129288747Clavibacter michiganensis subsp. michiganensis NCPPB 382, completetranscriptional regulator, TetR family3e-64244
NC_013093:5791961:581324958132495813830582Actinosynnema mirum DSM 43827, complete genometranscriptional regulator, TetR family5e-29127
NC_013929:2583849:258533825853382585931594Streptomyces scabiei 87.22 chromosome, complete genomeTetR family transcriptional regulator7e-29127
NC_009921:3666898:370507837050783705695618Frankia sp. EAN1pec, complete genometranscriptional regulator, TetR family1e-21103
NC_009921:3666898:373621137362113736819609Frankia sp. EAN1pec, complete genometranscriptional regulator, TetR family9e-21100
NC_009664:4423829:445172844517284452351624Kineococcus radiotolerans SRS30216, complete genometranscriptional regulator, TetR family4e-1788.2
NC_009921:522000:551311551311551880570Frankia sp. EAN1pec, complete genometranscriptional regulator, TetR family7e-1684
NC_005773:866157:882507882507883145639Pseudomonas syringae pv. phaseolicola 1448A, complete genometranscriptional regulator, TetR family4e-1478.2
NC_009921:5275694:529638452963845297010627Frankia sp. EAN1pec, complete genometranscriptional regulator, TetR family4e-1478.2
NC_009921:5275694:529173252917325292325594Frankia sp. EAN1pec, complete genometranscriptional regulator, TetR family8e-1477
NC_014246:611275:636808636808637455648Mobiluncus curtisii ATCC 43063 chromosome, complete genomeTetR family transcriptional regulator1e-1273.2
NC_017221:495088:514700514700515314615Bifidobacterium longum subsp. longum KACC 91563 chromosome,transcriptional regulator3e-1272
NC_015389:1858732:187731018773101877954645Coriobacterium glomerans PW2 chromosome, complete genometranscriptional regulator, TetR family4e-1168.2
NC_017219:711431:711431711431712018588Bifidobacterium longum subsp. infantis ATCC 15697, complete genomeputative transcriptional regulator2e-1066.2
NC_008618:1487000:149429714942971494932636Bifidobacterium adolescentis ATCC 15703, complete genomepossible TetR-type transcriptional regulator5e-0754.3
NC_014158:1651326:166301016630101663705696Tsukamurella paurometabola DSM 20162 chromosome, complete genometranscriptional regulator, TetR family1e-0653.1
NC_014915:3320768:336686733668673367790924Geobacillus sp. Y412MC52 chromosome, complete genomeregulatory protein TetR1e-0653.1
NC_008618:1487000:150279615027961503530735Bifidobacterium adolescentis ATCC 15703, complete genomepossible TetR-type transcriptional regulator2e-0652.4
NC_015953:3159234:316659831665983167191594Streptomyces sp. SirexAA-E chromosome, complete genomeTetR family transcriptional regulator6e-0650.8
NC_009668:1591290:159361715936171594213597Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequenceTetR family transcriptional regulator7e-0650.8
NC_017186:7480714:749817374981737498775603Amycolatopsis mediterranei S699 chromosome, complete genomeTetR family transcriptional regulator8e-0650.4
NC_014318:7480669:749812874981287498730603Amycolatopsis mediterranei U32 chromosome, complete genomeTetR family transcriptional regulator8e-0650.4
NC_010694:1966676:196889219688921969524633Erwinia tasmaniensis, complete genomeTetR-family transcriptional regulator8e-0650.4