Pre_GI: BLASTP Hits

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Query: NC_013929:6526745:6544278 Streptomyces scabiei 87.22 chromosome, complete genome

Start: 6544278, End: 6544955, Length: 678

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003155:6444500:646353364635336464231699Streptomyces avermitilis MA-4680, complete genomeTetR-family transcriptional regulator2e-56218
NC_010162:7824878:782765278276527828311660Sorangium cellulosum 'So ce 56', complete genomeHTH-type transcriptional regulator betI6e-1581.3
NC_005125:839000:855551855551856189639Gloeobacter violaceus PCC 7421, complete genomeTetR family transcriptional regulatory protein3e-1478.6
NC_006361:3132000:314393831439383144471534Nocardia farcinica IFM 10152, complete genomeputative transcriptional regulator6e-1167.8
NC_003295:856775:862903862903863580678Ralstonia solanacearum GMI1000, complete genomePUTATIVE TRANSCRIPTION REGULATOR PROTEIN2e-1066.2
NC_014311:263963:302984302984303634651Ralstonia solanacearum PSI07 chromosome, complete genomeTetR family transcriptional regulator2e-0859.3
NC_015563:5162177:517872451787245179383660Delftia sp. Cs1-4 chromosome, complete genomeregulatory protein TetR3e-0858.9
NC_013510:5394432:540910054091005409654555Thermomonospora curvata DSM 43183, complete genometranscriptional regulator, TetR family4e-0858.2
NC_013209:2759160:277140327714032772044642Acetobacter pasteurianus IFO 3283-01, complete genometranscriptional regulator TetR7e-0857.8
NC_007946:4875997:487845648784564879034579Escherichia coli UTI89, complete genomehypothetical protein8e-0857.4
NC_011658:4301633:431215343121534312740588Bacillus cereus AH187 chromosome, complete genomeTetR family transcriptional regulator8e-0857.4
NC_005957:4311679:432219943221994322786588Bacillus thuringiensis serovar konkukian str. 97-27, completetranscriptional regulator8e-0857.4
NC_011969:4235818:424498242449824245569588Bacillus cereus Q1 chromosome, complete genometranscriptional regulator8e-0857.4
NC_013510:3065000:307158930715893072076488Thermomonospora curvata DSM 43183, complete genome1e-0757
NC_009436:1141376:117882011788201179410591Enterobacter sp. 638, complete genomeTetR family transcriptional regulator9e-0753.9
NC_010545:2025000:203269620326962033367672Corynebacterium urealyticum DSM 7109, complete genomeputative transcriptional regulator (TetR family)8e-0753.9
NC_020409:393329:431903431903432490588Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeTranscriptional regulator, TetR family8e-0753.9
NC_012673:2535427:257965825796582580236579Exiguobacterium sp. AT1b, complete genometranscriptional regulator, TetR family1e-0653.1
NC_010814:155834:160065160065160667603Geobacter lovleyi SZ, complete genometranscriptional regulator, TetR family2e-0652.8
NC_005125:2811986:284435528443552845038684Gloeobacter violaceus PCC 7421, complete genomeTetR family transcriptional regulatory protein5e-0651.2
NC_009832:1664238:166517116651711665797627Serratia proteamaculans 568, complete genometranscriptional regulator, TetR family5e-0651.2