Some Help

Query: NC_013929:6526745:6543922 Streptomyces scabiei 87.22 chromosome, complete genome

Start: 6543922, End: 6544161, Length: 240

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.

Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia

SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003155:6444500:646298364629836463222240Streptomyces avermitilis MA-4680, complete genomecopper chaperone6e-22102
NC_016109:8256000:826751082675108267725216Kitasatospora setae KM-6054, complete genomeputative metal-binding protein1e-0858.5
NC_014815:4491413:449456244945624494846285Micromonospora sp. L5 chromosome, complete genomeheavy metal transport/detoxification protein3e-0753.9
NC_007164:622000:624970624970625188219Corynebacterium jeikeium K411, complete genomehypothetical protein2e-0650.8
NC_014151:4021394:405341440534144053638225Cellulomonas flavigena DSM 20109 chromosome, complete genomeHeavy metal transport/detoxification protein6e-0649.7