Pre_GI: BLASTP Hits

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Query: NC_013929:6526745:6536582 Streptomyces scabiei 87.22 chromosome, complete genome

Start: 6536582, End: 6536905, Length: 324

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015656:632960:648234648234648551318Frankia symbiont of Datisca glomerata chromosome, complete genomehelix-turn-helix domain-containing protein1e-1788.6
NC_009380:1885024:189456118945611895238678Salinispora tropica CNB-440 chromosome, complete genomehelix-turn-helix domain-containing protein6e-1785.9
NC_009380:1491428:150234615023461503023678Salinispora tropica CNB-440 chromosome, complete genomehelix-turn-helix domain-containing protein6e-1785.9
NC_015312:1371530:138341913834191383727309Pseudonocardia dioxanivorans CB1190 chromosome, complete genomehelix-turn-helix domain-containing protein8e-1682.4
NC_013929:6923884:693421769342176934555339Streptomyces scabiei 87.22 chromosome, complete genomeDNA-binding protein3e-1270.5
NC_013929:1799594:181924218192421819577336Streptomyces scabiei 87.22 chromosome, complete genometranscriptional regulator8e-1269.3
NC_008278:3601959:361812736181273618387261Frankia alni ACN14a, complete genomehypothetical protein2e-1167.8
NC_013595:7716759:774224077422407742578339Streptosporangium roseum DSM 43021, complete genomeputative transcriptional regulator, XRE family4e-0960.1
NC_013947:656140:663636663636663941306Stackebrandtia nassauensis DSM 44728 chromosome, complete genometranscriptional regulator, XRE family5e-0960.1
NC_016114:4922630:493510649351064935411306Streptomyces flavogriseus ATCC 33331 chromosome, complete genomehelix-turn-helix domain-containing protein2e-0754.7
NC_015563:334942:352847352847353158312Delftia sp. Cs1-4 chromosome, complete genomehelix-turn-helix domain-containing protein7e-0752.8
NC_008786:2729635:274660927466092746920312Verminephrobacter eiseniae EF01-2, complete genomehelix-turn-helix domain protein1e-0652