Some Help

Query: NC_013929:6526745:6531582 Streptomyces scabiei 87.22 chromosome, complete genome

Start: 6531582, End: 6531815, Length: 234

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.

Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia

SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016113:11500:286142861429003390Streptomyces cattleya NRRL 8057 plasmid pSCAT, complete sequenceribose ABC transporter (membrane bound ribose binding)3e-24110
NC_021177:7159654:718079171807917181180390Streptomyces fulvissimus DSM 40593, complete genomeD-ribose pyranase 2 n13e-21100
NC_017208:671128:680051680051680446396Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeD-ribose pyranase1e-1065.5
NC_011772:647778:655881655881656276396Bacillus cereus G9842, complete genomeribose ABC transporter protein1e-1065.5
NC_018665:2163713:218550121855012185890390Exiguobacterium antarcticum B7 chromosome, complete genomeD-ribose pyranase1e-0961.6
NC_011725:681387:687974687974688369396Bacillus cereus B4264 chromosome, complete genomeD-ribose pyranase2e-0960.8
NC_016614:686887:699051699051699470420Vibrio sp. EJY3 chromosome 2, complete sequenceD-ribose pyranase3e-0857.4
NC_010556:2328303:234760123476012347990390Exiguobacterium sibiricum 255-15, complete genomeRbsD or FucU transport3e-0857
NC_006085:15246:222142221422597384Propionibacterium acnes KPA171202, complete genomehigh affinity ribose transport protein RbsD2e-0754.3
NC_014039:15236:222032220322586384Propionibacterium acnes SK137 chromosome, complete genomeRibose ABC transport system, high affinity permease RbsD2e-0754.3
NC_016516:15102:220702207022453384Propionibacterium acnes TypeIA2 P.acn33 chromosome, completeD-ribose pyranase3e-0753.5
NC_016512:15102:220702207022453384Propionibacterium acnes TypeIA2 P.acn17 chromosome, completeD-ribose pyranase3e-0753.5
NC_016511:15100:220682206822451384Propionibacterium acnes TypeIA2 P.acn31 chromosome, completeD-ribose pyranase3e-0753.5
NC_012785:638000:648054648054648452399Kosmotoga olearia TBF 19.5.1, complete genomeRbsD or FucU transport1e-0652
NC_015161:1556766:156242115624211562816396Deinococcus proteolyticus MRP chromosome, complete genomeD-ribose pyranase6e-0649.7