Pre_GI: BLASTP Hits

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Query: NC_013929:6343000:6360240 Streptomyces scabiei 87.22 chromosome, complete genome

Start: 6360240, End: 6361994, Length: 1755

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_018681:7191008:7202474720247472043091836Nocardia brasiliensis ATCC 700358 chromosome, complete genomehypothetical protein0761
NC_016582:6999074:7005073700507370068901818Streptomyces bingchenggensis BCW-1 chromosome, complete genomeputative DNA-binding protein0689
NC_016114:3439273:3447609344760934494291821Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeSNF2-like protein0688
NC_017186:10070795:1007973810079738100815641827Amycolatopsis mediterranei S699 chromosome, complete genomeDNA/RNA helicase0687
NC_014318:10070730:1007967310079673100814991827Amycolatopsis mediterranei U32 chromosome, complete genomeDNA/RNA helicase0687
NC_017098:986428:1000534100053410023481815Spirochaeta africana DSM 8902 chromosome, complete genomeDNA/RNA helicase9e-85314
NC_008687:965152:9753979753979773071911Paracoccus denitrificans PD1222 chromosome 2, complete sequencehelicase domain protein8e-70265
NC_015589:366296:3752763752763770751800Desulfotomaculum ruminis DSM 2154 chromosome, complete genomehelicase domain-containing protein2e-66253
NC_015152:2831566:2841216284121628432071992Spirochaeta sp. Buddy chromosome, complete genomeSNF2-related protein6e-50199
NC_015975:923812:9357169357169375991884Lactobacillus ruminis ATCC 27782 chromosome, complete genomeSNF2 family helicase1e-47191
NC_008618:1526392:1535700153570015383722673Bifidobacterium adolescentis ATCC 15703, complete genomehelicase3e-44180
NC_010610:1178430:1205042120504212069341893Lactobacillus fermentum IFO 3956, complete genomehelicase4e-44179
NC_015391:2523451:2523451252345125258952445Carnobacterium sp. 17-4 chromosome, complete genomehypothetical protein5e-40166
NC_015259:1803266:1814614181461418160591446Polymorphum gilvum SL003B-26A1 chromosome, complete genomeHelicase domain protein1e-26121
NC_016627:4323370:4365269436526943667141446Clostridium clariflavum DSM 19732 chromosome, complete genomeDNA/RNA helicase7e-26119
NC_016633:2688144:2697911269791126993891479Sphaerochaeta pleomorpha str. Grapes chromosome, complete genomeDNA/RNA helicase1e-22108
NC_010337:2848360:2851573285157328529221350Heliobacterium modesticaldum Ice1, complete genomesnf2 family helicase4e-22106
NC_007005:2149275:2163618216361821663622745Pseudomonas syringae pv. syringae B728a, complete genomeSNF2-related:Helicase, C-terminal:SWIM Zn-finger1e-1275.5
NC_014624:2996377:2997562299756229992831722Eubacterium limosum KIST612 chromosome, complete genomehypothetical protein7e-1272.8
NC_016751:1776669:1778274177827417812402967Marinitoga piezophila KA3 chromosome, complete genomeDNA/RNA helicase2e-0964.7
NC_017167:1648913:1650108165010816518261719Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1SNF2-related protein4e-0963.5
NC_012804:1514533:1525056152505615283583303Thermococcus gammatolerans EJ3, complete genomeType III restriction endonuclease, res subunit5e-0860.1
NC_019940:2236630:2236630223663022397883159Thioflavicoccus mobilis 8321 chromosome, complete genomeDNA/RNA helicase1e-0655.1
NC_013205:1275012:1279858127985812833703513Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,helicase domain protein2e-0654.7