Pre_GI: BLASTP Hits

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Query: NC_013929:5850599:5865374 Streptomyces scabiei 87.22 chromosome, complete genome

Start: 5865374, End: 5866114, Length: 741

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_019673:8161242:816215981621598162875717Saccharothrix espanaensis DSM 44229 complete genomeTranscriptional regulator, TetR family4e-72271
NC_013595:41245:412454124541949705Streptosporangium roseum DSM 43021, complete genomeputative transcriptional regulator, TetR family9e-33140
NC_015434:2683631:270247427024742703091618Verrucosispora maris AB-18-032 chromosome, complete genomeTetR family transcriptional regulator8e-25114
NC_013757:21245:245362453625210675Geodermatophilus obscurus DSM 43160, complete genometranscriptional regulator, TetR family6e-24111
NC_010162:9311465:931658793165879317582996Sorangium cellulosum 'So ce 56', complete genomeputative transcriptional regulator5e-2098.2
NC_014221:1518583:152696715269671527650684Truepera radiovictrix DSM 17093 chromosome, complete genometranscriptional regulator, TetR family1e-1996.7
NC_015953:2603526:261081926108192611727909Streptomyces sp. SirexAA-E chromosome, complete genomeGntR family transcriptional regulator1e-1790.1
NC_003888:4750489:477221547722154773021807Streptomyces coelicolor A3(2), complete genometetR family transcriptional regulatory protein2e-1686.3
NC_013595:6978614:699085969908596991533675Streptosporangium roseum DSM 43021, complete genomeputative transcriptional regulator, TetR family5e-1684.7
NC_008596:3404832:340867134086713409429759Mycobacterium smegmatis str. MC2 155, complete genometranscriptional regulator, TetR family protein5e-1684.7
NC_014210:4122514:412595441259544126646693Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,transcriptional regulator, TetR family4e-1581.6
NC_015656:2565417:258060425806042581263660Frankia symbiont of Datisca glomerata chromosome, complete genomeregulatory protein TetR1e-1480.5
NC_016109:327826:332145332145332954810Kitasatospora setae KM-6054, complete genomeputative TetR family transcriptional regulator1e-1480.1
NC_009921:4948500:497210549721054972827723Frankia sp. EAN1pec, complete genometranscriptional regulator, TetR family3e-1479
NC_016111:986936:100046210004621001124663Streptomyces cattleya NRRL 8057, complete genomeTetR-family transcriptional regulator1e-1377
NC_016582:5769080:577043057704305771146717Streptomyces bingchenggensis BCW-1 chromosome, complete genomeTetR family transcriptional regulator1e-1376.6
NC_003888:8613848:861831386183138618951639Streptomyces coelicolor A3(2), complete genomeTetR-family transcriptional regulator7e-1374.3
NC_002944:99000:104739104739105512774Mycobacterium avium subsp. paratuberculosis K-10, complete genomehypothetical protein1e-1273.9
NC_013595:3541012:355596035559603556841882Streptosporangium roseum DSM 43021, complete genomeputative transcriptional regulator, GntR family2e-1272.8
NC_009349:3396:339633964028633Aeromonas salmonicida subsp. salmonicida A449 plasmid 4, completetetracycline repressor protein TetR(E)4e-1271.6
NC_003155:921494:925541925541926167627Streptomyces avermitilis MA-4680, complete genomeTetR-family transcriptional regulator9e-1270.5
NC_014623:4683671:468649946864994687191693Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeTetR family transcriptional regulator1e-1170.5
NC_015671:3093596:309531530953153096085771Cellvibrio gilvus ATCC 13127 chromosome, complete genomeregulatory protein TetR1e-1170.1
NC_008595:5168941:520266052026605203292633Mycobacterium avium 104, complete genometranscriptional regulator, TetR family protein2e-1169.3
NC_003155:622993:634378634378635061684Streptomyces avermitilis MA-4680, complete genomeTetR-family transcriptional regulator2e-1169.3
NC_013929:3953046:395783739578373958523687Streptomyces scabiei 87.22 chromosome, complete genomeTetR family transcriptional regulator3e-1168.9
NC_014815:6576983:658020065802006580892693Micromonospora sp. L5 chromosome, complete genomeregulatory protein tetr5e-1168.2
NC_007777:2543475:255182225518222552403582Frankia sp. CcI3, complete genometranscriptional regulator, TetR family6e-1168.2
NC_010519:1963256:197888119788811979504624Haemophilus somnus 2336 chromosome, complete genomeTetR family transcriptional regulator6e-1167.8
NC_014976:684000:689323689323690003681Bacillus subtilis BSn5 chromosome, complete genomeTranscriptional regulator9e-1167.4
NC_016109:6816000:683519868351986835905708Kitasatospora setae KM-6054, complete genomeputative TetR family transcriptional regulator8e-1167.4
NC_013757:3717500:373045537304553731231777Geodermatophilus obscurus DSM 43160, complete genometranscriptional regulator, TetR family8e-1167.4
NC_014659:2769486:278075327807532781463711Rhodococcus equi 103S, complete genomeTetR family transcriptional regulator3e-1065.9
NC_011749:34056:448344483445460627Escherichia coli UMN026 plasmid p1ESCUM, complete sequenceTetR family transcriptional regulator4e-1065.5
CU928145:4950723:497335049733504973976627Escherichia coli 55989 chromosome, complete genomeTetracycline repressor protein class B from transposon Tn104e-1065.5
NC_011748:4950723:497335049733504973976627Escherichia coli 55989, complete genometetracycline repressor protein TetR4e-1065.5
NC_010939:405477:417091417091417717627Actinobacillus pleuropneumoniae serovar 7 str. AP76, completeTetracycline repressor protein class B from transposon Tn104e-1065.5
NC_003384:157158:179219179219179845627Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmidtetracycline repressor protein4e-1065.5
NC_013365:92973:959939599396619627Escherichia coli O111:H- str. 11128 plasmid pO111_1, completeTetR family transcriptional regulator4e-1065.5
NC_017171:280762:286950286950287576627Acinetobacter baumannii MDR-ZJ06 chromosome, complete genometetracycline repressor protein TetR4e-1065.5
NC_017328:1075535:110734211073421107968627Shigella flexneri 2002017 chromosome, complete genomeTetracycline repressor protein class B from transposon Tn104e-1065.5
NC_017328:1075535:111874711187471119373627Shigella flexneri 2002017 chromosome, complete genomeTetracycline repressor protein class B from transposon Tn104e-1065.5
NC_017387:247462:288973288973289599627Acinetobacter baumannii TCDC-AB0715 chromosome, complete genometetracycline repressor protein class G4e-1065.5
NC_016860:4055117:406437340643734064996624Salmonella enterica subsp. enterica serovar Typhimurium strtetracycline repressor protein TetR4e-1065.5
NC_020418:448687:458161458161458784624Morganella morganii subsp. morganii KT, complete genomehypothetical protein3e-1065.5
NC_017904:1831071:183107118310711831727657Mycobacterium sp. MOTT36Y chromosome, complete genomeregulatory protein TetR2e-0963.2
NC_008526:74500:104011104011104658648Lactobacillus casei ATCC 334, complete genomeTranscriptional regulator2e-0962.8
NC_013947:1696671:172178617217861722718933Stackebrandtia nassauensis DSM 44728 chromosome, complete genometranscriptional regulator, TetR family3e-0962.4
NC_013947:1537275:154742115474211548170750Stackebrandtia nassauensis DSM 44728 chromosome, complete genometranscriptional regulator, TetR family3e-0962.4
NC_009664:1434974:145201714520171452733717Kineococcus radiotolerans SRS30216, complete genometranscriptional regulator, TetR family3e-0962
NC_012668:3037345:304768430476843048361678Vibrio cholerae MJ-1236 chromosome 1, complete sequencetetracycline repressor5e-0961.6
NC_011586:268927:291388291388292065678Acinetobacter baumannii AB0057 chromosome, complete genometetracycline repressor protein, class A5e-0961.6
NC_010410:3606826:364313736431373643814678Acinetobacter baumannii AYE, complete genometetracycline repressor protein5e-0961.6
NC_008268:442657:443606443606444277672Rhodococcus sp. RHA1, complete genomeprobable tetracycline repressor protein5e-0961.6
NC_013131:4473410:449156644915664492117552Catenulispora acidiphila DSM 44928, complete genometranscriptional regulator, TetR family6e-0961.2
NC_014318:1320170:132823613282361328820585Amycolatopsis mediterranei U32 chromosome, complete genomeTetR family transcriptional regulator5e-0961.2
NC_017186:1320186:132825213282521328836585Amycolatopsis mediterranei S699 chromosome, complete genomeTetR family transcriptional regulator5e-0961.2
NC_010410:3606826:367271136727113673337627Acinetobacter baumannii AYE, complete genomeTetracycline repressor protein class G8e-0960.8
NC_012803:1094679:111035611103561111048693Micrococcus luteus NCTC 2665, complete genometranscriptional regulator, tetR family1e-0860.5
NC_013204:799857:802075802075802731657Eggerthella lenta DSM 2243, complete genometranscriptional regulator, TetR family1e-0860.1
NC_009664:1434974:145727214572721457886615Kineococcus radiotolerans SRS30216, complete genomeTetracyclin repressor domain protein2e-0859.3
NC_008686:1439328:145266814526681453366699Paracoccus denitrificans PD1222 chromosome 1, complete sequencetranscriptional regulator, TetR family3e-0859.3
NC_009838:81913:908869088691545660Escherichia coli APEC O1 plasmid pAPEC-O1-R, complete sequencehypothetical protein3e-0858.9
NC_008268:442657:456425456425457084660Rhodococcus sp. RHA1, complete genomeprobable tetracycline repressor protein6e-0857.8
NC_014391:1317957:132412413241241324828705Micromonospora aurantiaca ATCC 27029 chromosome, complete genomeregulatory protein TetR8e-0857.4
NC_013169:1845735:185943718594371859958522Kytococcus sedentarius DSM 20547, complete genometranscriptional regulator, tetR family2e-0756.6
NC_009921:3419978:343335534333553434005651Frankia sp. EAN1pec, complete genometranscriptional regulator, TetR family1e-0653.9
NC_007974:138176:172355172355173233879Ralstonia metallidurans CH34 chromosome 2, complete sequenceputative transcriptional regulator, TetR family2e-0652.8
NC_012704:696374:715196715196716023828Corynebacterium kroppenstedtii DSM 44385, complete genometranscriptional regulator, TetR family2e-0652.8
NC_014666:1805806:181757918175791818220642Frankia sp. EuI1c chromosome, complete genomeTetracyclin repressor domain-containing protein3e-0652