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Query: NC_013929:4549988:4567280 Streptomyces scabiei 87.22 chromosome, complete genome

Start: 4567280, End: 4569235, Length: 1956

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016582:5987039:6000038600003860017711734Streptomyces bingchenggensis BCW-1 chromosome, complete genomeType IV secretory pathway VirD4 protein-like protein5e-1893.2
NC_009921:1668306:1671183167118316731531971Frankia sp. EAN1pec, complete genomeType IV secretory pathway VirD4 protein-like protein3e-1790.9
NC_019673:2051363:2049600204960020513661767Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein5e-1067
NC_013131:10322152:1035461310354613103564541842Catenulispora acidiphila DSM 44928, complete genomeconjugative transfer gene complex protein9e-1065.9
NC_013947:5747385:5766988576698857688231836Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeType IV secretory pathway VirD4 protein-like protein1e-0862.4
NC_014549:14000:3245132451342471797Arthrobacter arilaitensis Re117 plasmid pRE117-1, completeTraG-family bacterial conjugation protein9e-0859.3
NC_010125:2998619:3001295300129530033162022Gluconacetobacter diazotrophicus PAl 5, complete genomeputative conjugal transfer protein traG7e-0756.2
NC_013757:729986:7311967311967331061911Geodermatophilus obscurus DSM 43160, complete genomeType IV secretory pathway VirD4 protein-like protein1e-0655.5
NC_015942:722980:7396097396097418762268Acidithiobacillus ferrivorans SS3 chromosome, complete genomeTRAG family protein4e-0653.9
NC_007797:1451804:1460198146019814624202223Anaplasma phagocytophilum HZ, complete genometype IV secretion system protein VirD48e-0652.8