Pre_GI: BLASTP Hits

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Query: NC_013929:3722867:3736306 Streptomyces scabiei 87.22 chromosome, complete genome

Start: 3736306, End: 3738102, Length: 1797

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003888:7561923:7621458762145876231851728Streptomyces coelicolor A3(2), complete genomehypothetical protein0964
NC_013929:2536255:2542598254259825443911794Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein0961
NC_018750:6070260:6092603609260360943991797Streptomyces venezuelae ATCC 10712, complete genomehypothetical protein0844
NC_016111:2912962:2912962291296229147431782Streptomyces cattleya NRRL 8057, complete genomehypothetical protein0638
NC_003888:3893187:3893187389318738944701284Streptomyces coelicolor A3(2), complete genomehypothetical protein9e-154543
NC_014549:14000:3245132451342471797Arthrobacter arilaitensis Re117 plasmid pRE117-1, completeTraG-family bacterial conjugation protein2e-91337
NC_008713:259791:2853822853822871271746Arthrobacter aurescens TC1 plasmid TC2, complete sequenceputative traG-family protein2e-72273
NC_014158:233733:2719842719842737351752Tsukamurella paurometabola DSM 20162 chromosome, complete genomeconjugal transfer protein3e-58226
NC_019673:2051363:2049600204960020513661767Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein1e-40167
NC_012803:691215:7071737071737090771905Micrococcus luteus NCTC 2665, complete genometype IV secretory pathway, VirD4 component3e-39164
NC_013947:5747385:5766988576698857688231836Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeType IV secretory pathway VirD4 protein-like protein1e-36155
NC_018532:166468:2135532135532152441692Arthrobacter sp. Rue61a plasmid p232, complete sequenceprotein, TraG family7e-36152
NC_013729:2157785:216022121602212160823603Kribbella flavida DSM 17836, complete genome2e-34147
NC_013131:10322152:1035461310354613103564541842Catenulispora acidiphila DSM 44928, complete genomeconjugative transfer gene complex protein8e-34145
NC_012803:3691:1490314903166871785Micrococcus luteus NCTC 2665, complete genomehypothetical protein2e-33144
NC_014830:3438504:3455500345550034572751776Intrasporangium calvum DSM 43043 chromosome, complete genomehypothetical protein3e-32140
NC_018524:3075000:3087918308791830893121395Nocardiopsis alba ATCC BAA-2165 chromosome, complete genometype IV secretory system Conjugative DNA transfer family protein3e-24113
NC_016943:1422926:1427177142717714290901914Blastococcus saxobsidens DD2, complete genomehypothetical protein2e-23110
NC_013729:2258582:2274288227428822766632376Kribbella flavida DSM 17836, complete genomeType IV secretory pathway VirD4 protein-like protein4e-22106
NC_013757:729986:7311967311967331061911Geodermatophilus obscurus DSM 43160, complete genomeType IV secretory pathway VirD4 protein-like protein8e-22105
NC_017955:3057592:3100018310001831015291512Modestobacter marinus, complete genomeconjugative transfer gene complex protein6e-2099.4
NC_009921:1668306:1671183167118316731531971Frankia sp. EAN1pec, complete genomeType IV secretory pathway VirD4 protein-like protein8e-1995.9
NC_017955:3670670:3721026372102637225311506Modestobacter marinus, complete genometype IV secretory pathway VirD4-like5e-1893.2
NC_016582:5987039:6000038600003860017711734Streptomyces bingchenggensis BCW-1 chromosome, complete genomeType IV secretory pathway VirD4 protein-like protein1e-1791.7
NC_003888:4523500:4538504453850445399911488Streptomyces coelicolor A3(2), complete genomehypothetical protein1e-1482.4
NC_010572:4585500:4602089460208946037051617Streptomyces griseus subsp. griseus NBRC 13350, complete genomehypothetical protein2e-1480.9
NC_003155:5005913:5021723502172350233511629Streptomyces avermitilis MA-4680, complete genomehypothetical protein7e-1479.3
NC_014215:1243125:124427112442711244885615Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,2e-1170.9
NC_010337:616304:6198006198006216201821Heliobacterium modesticaldum Ice1, complete genometrag/trad family protein, putative5e-1170.1
NC_007907:960104:1031622103162210334421821Desulfitobacterium hafniense Y51, complete genomehypothetical protein9e-1065.9
NC_021184:3533500:3549757354975735515741818Desulfotomaculum gibsoniae DSM 7213, complete genometype IV secretory pathway, VirD4 component2e-0965.1
NC_018867:1357540:1360767136076713625871821Dehalobacter sp. CF chromosome, complete genomeTRAG family protein2e-0964.7
NC_018866:1279000:1282227128222712840471821Dehalobacter sp. DCA chromosome, complete genomeTRAG family protein2e-0964.7
NC_007907:5185510:5263303526330352651201818Desulfitobacterium hafniense Y51, complete genomehypothetical protein2e-0964.3
NC_018870:757416:7824677824677843051839Thermacetogenium phaeum DSM 12270 chromosome, complete genomeTRAG-like protein5e-0963.2
NC_016791:3953972:3982848398284839846681821Clostridium sp. BNL1100 chromosome, complete genometype IV secretory pathway, VirD4 component3e-0860.5
NC_013929:4549988:4567280456728045692351956Streptomyces scabiei 87.22 chromosome, complete genomeTraG/TraD family protein6e-0859.7
NC_016791:3891272:3914625391462539164421818Clostridium sp. BNL1100 chromosome, complete genometype IV secretory pathway, VirD4 component3e-0757.4
NC_011837:3814000:3839101383910138409031803Clostridium kluyveri NBRC 12016, complete genomehypothetical protein4e-0757
NC_009706:3882500:3907598390759839094001803Clostridium kluyveri DSM 555 chromosome, complete genomeTraG-like protein4e-0757
NC_013766:1835964:1851550185155018533521803Listeria monocytogenes 08-5578 chromosome, complete genometype IV secretion system protein VirD41e-0655.5
NC_013768:1802313:1818281181828118200831803Listeria monocytogenes 08-5923, complete genometype IV secretion system protein VirD41e-0655.5
NC_016048:4163225:4199650419965042014521803Oscillibacter valericigenes Sjm18-20, complete genomehypothetical protein2e-0654.7
NC_017249:1476500:1492665149266514943411677Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein5e-0653.1
NC_014376:3009403:3033976303397630358231848Clostridium saccharolyticum WM1 chromosome, complete genomeTRAG family protein6e-0653.1