Pre_GI: BLASTP Hits

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Query: NC_013929:3299736:3344353 Streptomyces scabiei 87.22 chromosome, complete genome

Start: 3344353, End: 3345213, Length: 861

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013510:5115500:513356551335655134404840Thermomonospora curvata DSM 43183, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily6e-108390
NC_010572:4181403:419463741946374195470834Streptomyces griseus subsp. griseus NBRC 13350, complete genomehypothetical protein9e-46184
NC_015312:5876957:588973458897345890561828Pseudonocardia dioxanivorans CB1190 chromosome, complete genomehypothetical protein9e-31134