Pre_GI: BLASTP Hits

Some Help

Query: NC_013929:3299736:3308970 Streptomyces scabiei 87.22 chromosome, complete genome

Start: 3308970, End: 3311168, Length: 2199

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014814:3926676:3927831392783139300322202Mycobacterium sp. Spyr1 chromosome, complete genomehypothetical protein4e-101369
NC_013441:1487058:1501173150117315033862214Gordonia bronchialis DSM 43247, complete genomehypothetical protein7e-94345
NC_021175:1291707:1296743129674312989622220Streptococcus oligofermentans AS 1.3089, complete genomehypothetical protein2e-73277
NC_013235:2257899:2279877227987722820632187Nakamurella multipartita DSM 44233, complete genomehypothetical protein4e-66253
NC_015312:1265797:1290274129027412928172544Pseudonocardia dioxanivorans CB1190 chromosome, complete genomehypothetical protein4e-55216
NC_014815:6616500:6690092669009266925572466Micromonospora sp. L5 chromosome, complete genometype iv secretory pathway vird4 protein-like protein1e-53211
NC_015434:2460053:2460053246005324625062454Verrucosispora maris AB-18-032 chromosome, complete genometype iv secretory pathway vird4 protein-like protein1e-52208
NC_016582:10159486:1016151510161515101639262412Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein3e-51203
NC_016109:5768000:5790543579054357928252283Kitasatospora setae KM-6054, complete genomehypothetical protein3e-48193
NC_009921:8147947:8183023818302381855152493Frankia sp. EAN1pec, complete genomeType IV secretory pathway VirD4 protein-like protein7e-48192
NC_013131:8480384:8510912851091285130712160Catenulispora acidiphila DSM 44928, complete genometype IV secretory pathway VirD4 components-like protein3e-47190
NC_013739:5535945:5561534556153455629971464Conexibacter woesei DSM 14684, complete genome7e-47189
NC_013131:7889127:7911947791194779144482502Catenulispora acidiphila DSM 44928, complete genometype IV secretory pathway VirD4 protein-like protein2e-46187
NC_013131:9903320:9950773995077399531512379Catenulispora acidiphila DSM 44928, complete genometype IV secretory pathway VirD4 protein-like protein3e-45184
NC_014318:2252417:2265938226593822681002163Amycolatopsis mediterranei U32 chromosome, complete genomeTraG/VirD4-like conjugation protein involved in type IV secretion6e-41169
NC_017186:2252438:2265959226595922681212163Amycolatopsis mediterranei S699 chromosome, complete genomeTraG/VirD4-like conjugation protein involved in type IV secretion6e-41169
NC_009719:336000:3382343382343395111278Parvibaculum lavamentivorans DS-1 chromosome, complete genomehypothetical protein3e-34147
NC_013967:2103968:2141380214138021432991920Haloferax volcanii DS2 chromosome, complete genomehypothetical protein4e-31136
NC_007645:6500059:6518226651822665194941269Hahella chejuensis KCTC 2396, complete genomehypothetical protein3e-30134
NC_007645:6500059:6514402651440265167352334Hahella chejuensis KCTC 2396, complete genomepredicted ATPase3e-27124
NC_013849:376676:3872213872213900342814Ferroglobus placidus DSM 10642 chromosome, complete genomehypothetical protein6e-24113
NC_003911:1265972:1286092128609212872551164Silicibacter pomeroyi DSS-3, complete genomehypothetical protein7e-23109
NC_008726:6335961:6350099635009963523542256Mycobacterium vanbaalenii PYR-1, complete genomehypothetical protein9e-22105
NC_008554:2469156:248755924875592488176618Syntrophobacter fumaroxidans MPOB, complete genomehypothetical protein8e-1892.8
NC_014297:1037457:1042753104275310455752823Halalkalicoccus jeotgali B3 chromosome, complete genomehypothetical protein1e-1482.4
NC_019964:2816990:2840424284042428434683045Halovivax ruber XH-70, complete genometype IV secretory pathway, VirD4 component2e-1275.1
NC_013849:376676:3766763766763783761701Ferroglobus placidus DSM 10642 chromosome, complete genomehypothetical protein3e-1274.7
NC_012030:345837:3881903881903920203831Halorubrum lacusprofundi ATCC 49239 plasmid pHLAC01, completehypothetical protein5e-1170.5
NC_003911:1265972:1292876129287612951822307Silicibacter pomeroyi DSS-3, complete genomehypothetical protein5e-1170.1
NC_019974:1115553:1115553111555311186003048Natronococcus occultus SP4, complete genomehypothetical protein5e-1067
NC_008699:1067855:1078861107886110812362376Nocardioides sp. JS614, complete genomehypothetical protein1e-0758.9