Pre_GI: BLASTP Hits

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Query: NC_013929:3299736:3307371 Streptomyces scabiei 87.22 chromosome, complete genome

Start: 3307371, End: 3307766, Length: 396

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013235:5127148:516150751615075161896390Nakamurella multipartita DSM 44233, complete genometranscriptional regulator, XRE family5e-1476.3
NC_013441:1487058:149736814973681497811444Gordonia bronchialis DSM 43247, complete genomehelix-turn-helix domain protein6e-1476.3
NC_014814:3926676:393666439366643937116453Mycobacterium sp. Spyr1 chromosome, complete genometranscriptional regulator2e-1374.7
NC_013205:1123280:113253211325321133152621Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,transcriptional regulator, XRE family4e-1270.1
NC_014479:3245126:324993332499333250340408Bacillus subtilis subsp. spizizenii str. W23 chromosome, completetranscriptional repressor4e-1166.6
NC_016047:3406488:340648834064883406907420Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completehypothetical protein2e-1064.3
NC_014479:3245126:325036932503693250788420Bacillus subtilis subsp. spizizenii str. W23 chromosome, completeputative transcriptional repressor3e-1063.9
NC_015573:1979202:199861019986101999377768Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomehelix-turn-helix domain-containing protein6e-0856.2
NC_007356:51080:852428524285613372Dehalococcoides sp. CBDB1, complete genomehypothetical protein7e-0855.8
NC_014960:1697818:171901417190141719634621Anaerolinea thermophila UNI-1, complete genomehypothetical protein1e-0755.1
NC_020133:2421965:242756024275602427799240Mycobacterium liflandii 128FXT, complete genometranscriptional regulator2e-0754.7
NC_008576:3307297:331297933129793313362384Magnetococcus sp. MC-1, complete genometranscriptional regulator, XRE family4e-0753.5
NC_014483:1179286:118168111816811182154474Paenibacillus polymyxa E681 chromosome, complete genomePredicted transcriptional regulator4e-0753.5
NC_016641:2950000:295057629505762951046471Paenibacillus terrae HPL-003 chromosome, complete genometranscriptional regulator8e-0752.4
NC_016935:2069562:208239820823982083063666Paenibacillus mucilaginosus 3016 chromosome, complete genomeXRE family transcriptional regulator1e-0652
NC_012791:2386000:239303923930392393611573Variovorax paradoxus S110 chromosome 1, complete genometranscriptional regulator, XRE family1e-0651.6
NC_011283:1178500:118395211839521184521570Klebsiella pneumoniae 342 chromosome, complete genomeDNA-binding protein2e-0651.2