Pre_GI: BLASTP Hits

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Query: NC_013929:10133902:10140009 Streptomyces scabiei 87.22 chromosome, complete genome

Start: 10140009, End: 10141169, Length: 1161

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014550:7560:2566025660270091350Arthrobacter arilaitensis Re117, complete genome1e-0861.6
NC_019697:1879769:1885406188540618864881083Chamaesiphon minutus PCC 6605, complete genomesite-specific recombinase XerD4e-0859.7
NC_009328:3504454:3529966352996635311051140Geobacillus thermodenitrificans NG80-2 chromosome, complete genometransposition regulatory protein TnpA1e-1067.8
NC_009328:2161116:2201942220194222030811140Geobacillus thermodenitrificans NG80-2 chromosome, complete genometransposition regulatory protein TnpA1e-1067.8
NC_008705:1790222:1820156182015618212501095Mycobacterium sp. KMS, complete genomephage integrase family protein4e-1479.3
NC_014814:1397429:1412700141270014138811182Mycobacterium sp. Spyr1 chromosome, complete genomesite-specific recombinase XerD5e-0652.4
NC_013235:4091185:4105058410505841062391182Nakamurella multipartita DSM 44233, complete genomeintegrase family protein1e-0757.8
NC_013235:3812838:3815932381593238171131182Nakamurella multipartita DSM 44233, complete genomeintegrase family protein1e-0757.8
NC_013235:4045589:4059933405993340611141182Nakamurella multipartita DSM 44233, complete genomeintegrase family protein1e-0757.8
NC_013235:1325975:1336864133686413380451182Nakamurella multipartita DSM 44233, complete genomeintegrase family protein1e-0757.8
NC_018681:5551000:5571451557145155726591209Nocardia brasiliensis ATCC 700358 chromosome, complete genometransposase7e-51201
NC_008271:119957:1382081382081393381131Rhodococcus sp. RHA1 plasmid pRHL3, complete sequenceprobable integrase/recombinase, XerC and XerD family7e-1065.5
NC_008268:7485710:7490210749021074914091200Rhodococcus sp. RHA1, complete genomepossible transposase1e-0861.6
NC_008268:3162824:3171624317162431728561233Rhodococcus sp. RHA1, complete genomepossible transposase6e-45181
NC_010572:3878660:3886592388659238877821191Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative phage integrase7e-0858.5