Pre_GI: BLASTN Hits

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Query: NC_013766:679906 Listeria monocytogenes 08-5578 chromosome, complete genome

Start: 679906, End: 720947, Length: 41042

Host Lineage: Listeria monocytogenes; Listeria; Listeriaceae; Bacillales; Firmicutes; Bacteria

General Information: This organism, which causes listeriosis, is one of the leading causes of death from food-borne pathogens especially in pregnant women, newborns, the elderly, and immunocompromised individuals. It is found in environments such as decaying vegetable matter, sewage, water, and soil, and it can survive extremes of both temperatures (1-45 degrees C) and salt concentration marking it as an extremely dangerous food-born pathogen, especially on food that is not reheated. This organism is enteroinvasive, and utilizes an actin-based motility system by using a surface protein, ActA, that promotes actin polymerization, to spread intercellularly using the polymerized cytoskeletal protein as a "motor".




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008555:12040001204000124219438195Listeria welshimeri serovar 6b str. SLCC5334, complete genome03810BLASTN svgBLASTP svg
NC_003212:2413824*2413824244446830645Listeria innocua Clip11262, complete genome03477BLASTN svgBLASTP svg
NC_003210:23623062362306238100918704Listeria monocytogenes EGD-e, complete genome02056BLASTN svgBLASTP svg
NC_013891:57574657574659606620321Listeria seeligeri serovar 1/2b str. SLCC3954, complete genome01146BLASTN svgBLASTP svg
NC_003212:17139581713958174939635439Listeria innocua Clip11262, complete genome0999BLASTN svgBLASTP svg
NC_003212:12480001248000126620518206Listeria innocua Clip11262, complete genome0999BLASTN svgBLASTP svg
NC_003212:57061*5706110108744027Listeria innocua Clip11262, complete genome4e-105391BLASTN svgBLASTP svg
NC_003210:23804192380419239859918181Listeria monocytogenes EGD-e, complete genome2e-98369BLASTN svgBLASTP svg
NC_013891:16396941639694166876429071Listeria seeligeri serovar 1/2b str. SLCC3954, complete genome6e-21111BLASTN svgBLASTP svg
NC_002973:50597850597852836022383Listeria monocytogenes str. 4b F2365, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_010379:688068804619239313Clostridium botulinum B1 str. Okra plasmid pCLD, complete sequence8e-1177.8BLASTN svgBLASTP svg
NC_007622:1842000*1842000189289150892Staphylococcus aureus RF122, complete genome8e-0867.9BLASTN svgBLASTP svg
NC_018665:1*12938529385Exiguobacterium antarcticum B7 chromosome, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_010556:6612*66122825221641Exiguobacterium sibiricum 255-15, complete genome5e-0661.9BLASTN svgBLASTP svg