Pre_GI: BLASTN Hits

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Query: NC_013766:1293144 Listeria monocytogenes 08-5578 chromosome, complete genome

Start: 1293144, End: 1315599, Length: 22456

Host Lineage: Listeria monocytogenes; Listeria; Listeriaceae; Bacillales; Firmicutes; Bacteria

General Information: This organism, which causes listeriosis, is one of the leading causes of death from food-borne pathogens especially in pregnant women, newborns, the elderly, and immunocompromised individuals. It is found in environments such as decaying vegetable matter, sewage, water, and soil, and it can survive extremes of both temperatures (1-45 degrees C) and salt concentration marking it as an extremely dangerous food-born pathogen, especially on food that is not reheated. This organism is enteroinvasive, and utilizes an actin-based motility system by using a surface protein, ActA, that promotes actin polymerization, to spread intercellularly using the polymerized cytoskeletal protein as a "motor".




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_003212:2413824*2413824244446830645Listeria innocua Clip11262, complete genome04119BLASTN svgBLASTP svg
NC_008555:12040001204000124219438195Listeria welshimeri serovar 6b str. SLCC5334, complete genome03979BLASTN svgBLASTP svg
NC_003212:25926002592600261244219843Listeria innocua Clip11262, complete genome03493BLASTN svgBLASTP svg
NC_003212:17139581713958174939635439Listeria innocua Clip11262, complete genome01289BLASTN svgBLASTP svg
NC_003212:12480001248000126620518206Listeria innocua Clip11262, complete genome01289BLASTN svgBLASTP svg
NC_003210:23804192380419239859918181Listeria monocytogenes EGD-e, complete genome3e-40174BLASTN svgBLASTP svg
NC_014925:13145701314570133846423895Staphylococcus pseudintermedius HKU10-03 chromosome, complete5e-1487.7BLASTN svgBLASTP svg
NC_003212:57061*5706110108744027Listeria innocua Clip11262, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_003210:23623062362306238100918704Listeria monocytogenes EGD-e, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_012121:47414447414450609331950Staphylococcus carnosus subsp. carnosus TM300, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010079:21028562102856212916726312Staphylococcus aureus subsp. aureus USA300_TCH1516, complete7e-0763.9BLASTN svgBLASTP svg
NC_009782:20918152091815211324121427Staphylococcus aureus subsp. aureus Mu3, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_007793:20868962086896211336426469Staphylococcus aureus subsp. aureus USA300, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_002952:21257502125750215605630307Staphylococcus aureus subsp. aureus MRSA252, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_002758:21011372101137212959928463Staphylococcus aureus subsp. aureus Mu50, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_002745:20187612018761203681818058Staphylococcus aureus subsp. aureus N315, complete genome7e-0763.9BLASTN svgBLASTP svg