Pre_GI: BLASTN Hits

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Query: NC_013766:1202713 Listeria monocytogenes 08-5578 chromosome, complete genome

Start: 1202713, End: 1222339, Length: 19627

Host Lineage: Listeria monocytogenes; Listeria; Listeriaceae; Bacillales; Firmicutes; Bacteria

General Information: This organism, which causes listeriosis, is one of the leading causes of death from food-borne pathogens especially in pregnant women, newborns, the elderly, and immunocompromised individuals. It is found in environments such as decaying vegetable matter, sewage, water, and soil, and it can survive extremes of both temperatures (1-45 degrees C) and salt concentration marking it as an extremely dangerous food-born pathogen, especially on food that is not reheated. This organism is enteroinvasive, and utilizes an actin-based motility system by using a surface protein, ActA, that promotes actin polymerization, to spread intercellularly using the polymerized cytoskeletal protein as a "motor".




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_014654:11131161113116113933826223Halanaerobium sp. 'sapolanicus' chromosome, complete genome2e-19105BLASTN svgBLASTP svg
NC_015275:44935004493500451163218133Clostridium lentocellum DSM 5427 chromosome, complete genome2e-1281.8BLASTN svgBLASTP svg
NC_008261:13328641332864135143618573Clostridium perfringens ATCC 13124, complete genome2e-1281.8BLASTN svgBLASTP svg
NC_003366:11226541122654114059917946Clostridium perfringens str. 13, complete genome2e-1281.8BLASTN svgBLASTP svg
NC_010674:18229631822963184273319771Clostridium botulinum B str. Eklund 17B, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_010723:19671061967106199111924014Clostridium botulinum E3 str. Alaska E43, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_008262:11395001139500116059921100Clostridium perfringens SM101, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_014751:302152*30215232009917948Mycoplasma leachii PG50 chromosome, complete genome9e-0969.9BLASTN svgBLASTP svg
NC_013517:1055854*10558541161670105817Sebaldella termitidis ATCC 33386, complete genome9e-0969.9BLASTN svgBLASTP svg
NC_010723:20827502082750210459921850Clostridium botulinum E3 str. Alaska E43, complete genome9e-0969.9BLASTN svgBLASTP svg
NC_015391:695350*69535071865123302Carnobacterium sp. 17-4 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_019970:20804192080419209909918681Thermoanaerobacterium thermosaccharolyticum M0795, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_014328:12864071286407130824221836Clostridium ljungdahlii ATCC 49587 chromosome, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_010674:21857042185704221026824565Clostridium botulinum B str. Eklund 17B, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_014538:985339985339100713721799Thermoanaerobacter sp. X513 chromosome, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_014376:15866491586649160872922081Clostridium saccharolyticum WM1 chromosome, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_010001:17450891745089177589430806Clostridium phytofermentans ISDg, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_007633:253143*25314327396420822Mycoplasma capricolum subsp. capricolum ATCC 27343, complete2e-0661.9BLASTN svgBLASTP svg
NC_014614:284005*28400531809934095Clostridium sticklandii, complete genome9e-0660BLASTN svgBLASTP svg
NC_013721:276717*27671730391327197Gardnerella vaginalis 409-05, complete genome9e-0660BLASTN svgBLASTP svg