Pre_GI: BLASTP Hits

Some Help

Query: NC_013716:5201097:5275326 Citrobacter rodentium ICC168, complete genome

Start: 5275326, End: 5276582, Length: 1257

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009792:4017510:4018807401880740200631257Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein0826
NC_011147:3075186:3076488307648830777441257Salmonella enterica subsp. enterica serovar Paratyphi A strnucleoside permease0820
NC_006511:3079512:3080814308081430820701257Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCnucleoside permease0820
NC_011149:3187022:3188324318832431895801257Salmonella enterica subsp. enterica serovar Agona str. SL483,nucleoside permease NupG0819
NC_004631:3112043:3113345311334531146011257Salmonella enterica subsp. enterica serovar Typhi Ty2, completenucleoside permease0818
NC_003198:3126548:3127850312785031291061257Salmonella enterica subsp. enterica serovar Typhi str. CT18,nucleoside permease0818
NC_016832:3100683:3101985310198531032411257Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Nucleoside permease nupG0818
NC_010067:4418000:4441563444156344428191257Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein0811
NC_016845:4498097:4498097449809744993501254Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,nucleoside permease NupG0763
NC_008253:3122148:3123432312343231246881257Escherichia coli 536, complete genomenucleoside permease NupG0755
NC_020418:1364943:1367269136726913685221254Morganella morganii subsp. morganii KT, complete genomeXanthosine permease9e-131466
NC_019960:801589:8150618150618163111251Prevotella dentalis DSM 3688 chromosome 1, complete sequenceNucleoside H+ symporter5e-105381
NC_015947:1142206:1163389116338911646061218Burkholderia sp. JV3 chromosome, complete genomenucleoside:H symporter8e-62238
NC_011071:1178423:1199968119996812011851218Stenotrophomonas maltophilia R551-3, complete genomenucleoside:H symporter4e-59228
NC_014963:558000:5738395738395750861248Terriglobus saanensis SP1PR4 chromosome, complete genomenucleoside:H+ symporter1e-53211
NC_019892:3086493:3095192309519230964571266Singulisphaera acidiphila DSM 18658 chromosome, complete genomeNucleoside H+ symporter2e-53209
NC_011147:792489:7934907934907947611272Salmonella enterica subsp. enterica serovar Paratyphi A strnucleoside permease2e-49197
NC_006511:792543:7935447935447948151272Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative nucleoside permease2e-49197
NC_014121:3483976:3485281348528134865581278Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein4e-49196
NC_006905:2235607:2258789225878922600601272Salmonella enterica subsp. enterica serovar Choleraesuis strputative MFS family transport protein3e-49196
NC_011149:2179592:2201816220181622031321317Salmonella enterica subsp. enterica serovar Agona str. SL483,nucleoside transporter2e-49196
NC_003198:2179688:2201854220185422031251272Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative nucleoside permease2e-49196
NC_004631:799810:8008118008118020821272Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative nucleoside permease2e-49196
NC_015968:3053565:3066293306629330675701278Enterobacter asburiae LF7a chromosome, complete genomenucleoside transporter2e-48193
NC_016832:799764:8007658007658020361272Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,nucleoside transporter yegT2e-48193
NC_007384:2251792:2250518225051822517951278Shigella sonnei Ss046, complete genomeputative nucleoside permease protein6e-48192
NC_016822:2341127:2339853233985323411301278Shigella sonnei 53G, complete genomenucleoside permease6e-48192
NC_010473:2267851:2267851226785122691281278Escherichia coli str. K-12 substr. DH10B, complete genomepredicted nucleoside transporter5e-48192
NC_010468:1694729:1714899171489917161761278Escherichia coli ATCC 8739, complete genomenucleoside transporter5e-48192
CU928160:2239637:2238363223836322396401278Escherichia coli IAI1 chromosome, complete genomeputative hydrophilic substrate transporter; MFS superfamily5e-48192
NC_011741:2239637:2238363223836322396401278Escherichia coli IAI1 chromosome, complete genomeputative hydrophilic substrate MFS superfamily transporter5e-48192
NC_012759:2069326:2069326206932620706031278Escherichia coli BW2952 chromosome, complete genomeputative nucleoside transporter5e-48192
NC_011750:955451:9761839761839774601278Escherichia coli IAI39 chromosome, complete genomeputative hydrophilic substrate transporter; MFS superfamily4e-48192
NC_009792:642881:6599736599736612651293Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein3e-48192
CP002185:2347413:2347413234741323486901278Escherichia coli W, complete genomepredicted nucleoside transporter7e-48191
NC_016845:1407339:1408904140890414101091206Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,putative nucleoside H+ symporter7e-47188
NC_009436:1141376:1160925116092511621631239Enterobacter sp. 638, complete genomenucleoside:H+ symporter1e-46187
NC_016612:2902628:2904155290415529053961242Klebsiella oxytoca KCTC 1686 chromosome, complete genomeputative nucleoside H+ symporter2e-42173
NC_015663:3466471:3488800348880034900711272Enterobacter aerogenes KCTC 2190 chromosome, complete genomeProP protein9e-35148
NC_014394:522000:5333825333825345451164Gallionella capsiferriformans ES-2 chromosome, complete genomemajor facilitator superfamily MFS_11e-0964.7
NC_013526:530212:5320395320395332231185Thermobaculum terrenum ATCC BAA-798 chromosome 2, complete genomemajor facilitator superfamily MFS_15e-0962.8
NC_004347:3197219:3197219319721931983881170Shewanella oneidensis MR-1, complete genomemajor facilitator family protein, putative4e-0653.1
NC_008700:2607526:2607526260752626086951170Shewanella amazonensis SB2B, complete genomemajor facilitator superfamily MFS_15e-0652.8