Pre_GI: BLASTP Hits

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Query: NC_013716:5201097:5266647 Citrobacter rodentium ICC168, complete genome

Start: 5266647, End: 5267198, Length: 552

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011742:4655373:466732146673214667896576Escherichia coli S88 chromosome, complete genomehypothetical protein3e-102370
NC_008563:4739333:475265947526594753234576Escherichia coli APEC O1, complete genomehypothetical protein3e-102370
NC_004431:4270305:429575542957554296330576Escherichia coli CFT073, complete genomehypothetical protein1e-101368
NC_011662:2320100:235914123591412359752612Thauera sp. MZ1T, complete genomehypothetical protein2e-44178
NC_006138:225832:256916256916257563648Desulfotalea psychrophila LSv54, complete genomehypothetical protein2e-39161
NC_006270:4149004:416033341603334160917585Bacillus licheniformis ATCC 14580, complete genomehypothetical protein2e-29128
NC_018679:3843870:385428738542873854964678Alteromonas macleodii str. 'Balearic Sea AD45' chromosome, completehypothetical protein5e-1580.5