Pre_GI: BLASTP Hits

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Query: NC_013716:5201097:5258800 Citrobacter rodentium ICC168, complete genome

Start: 5258800, End: 5260584, Length: 1785

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011742:4655373:4662209466220946639931785Escherichia coli S88 chromosome, complete genomehypothetical protein01205
NC_008563:4739333:4747547474754747493311785Escherichia coli APEC O1, complete genomeputative KAP family P-loop domain containing protein01205
NC_004431:4270305:4299658429965843014421785Escherichia coli CFT073, complete genomehypothetical protein01205
NC_009792:3245368:3269805326980532715801776Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein0684
NC_010510:409469:4094694094694112441776Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, completeKAP P-loop domain protein4e-145515
NC_008347:2515921:2523066252306625248711806Maricaulis maris MCS10, complete genomeKAP P-loop domain protein3e-123442
NC_007086:2887875:2956010295601029578631854Xanthomonas campestris pv. campestris str. 8004, complete genomehypothetical protein2e-95350
NC_010322:5349000:5382289538228953841601872Pseudomonas putida GB-1 chromosome, complete genomeKAP P-loop domain-containing protein3e-95349
NC_003306:22228:2222822228241261899Agrobacterium tumefaciens str. C58 plasmid AT, complete sequencehypothetical protein3e-92339
NC_003064:22535:2253522535244331899Agrobacterium tumefaciens str. C58 plasmid AT, complete sequencehypothetical protein3e-92339
NC_007973:2348481:2365944236594423678121869Ralstonia metallidurans CH34 chromosome 1, complete sequenceKAP P-loop2e-78294
NC_008061:190287:2107852107852126711887Burkholderia cenocepacia AU 1054 chromosome 2, complete sequenceKAP P-loop6e-75282
NC_010515:2111691:2133783213378321356691887Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceKAP P-loop domain protein6e-75282
NC_011283:1178500:1189580118958011914571878Klebsiella pneumoniae 342 chromosome, complete genomeKAP family P-loop domain-containing protein3e-71269
NC_020181:5130513:5147323514732351492001878Enterobacter aerogenes EA1509E, complete genomePhage T7 exclusion protein1e-70268
NC_011662:1017933:1026772102677210287151944Thauera sp. MZ1T, complete genomeKAP P-loop domain protein2e-58227
NC_010162:8528116:8536406853640685383011896Sorangium cellulosum 'So ce 56', complete genomeP-loop ATPase2e-56220
NC_015410:3093465:3135543313554331375071965Pseudomonas mendocina NK-01 chromosome, complete genomekap P-loop domain-containing protein4e-56219
NC_013194:1040197:1048741104874110506871947Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completeKAP P-loop domain protein4e-55216
NC_006582:4256915:4267499426749942693251827Bacillus clausii KSM-K16, complete genomehypothetical protein4e-54213
NC_010337:98974:1103791103791122981920Heliobacterium modesticaldum Ice1, complete genomekap p-loop2e-50200
NC_009338:3029507:3046061304606130480762016Mycobacterium gilvum PYR-GCK chromosome, complete genomeKAP P-loop domain-containing protein5e-42172
NC_020133:2421965:2433646243364624353731728Mycobacterium liflandii 128FXT, complete genomeP-loop ATPase2e-36154
NC_008611:3579500:3587912358791235895371626Mycobacterium ulcerans Agy99, complete genomeP-loop ATPase1e-31138
NC_016609:4834378:4863175486317548653372163Niastella koreensis GR20-10 chromosome, complete genomeKAP P-loop domain-containing protein1e-1481.6
NC_019673:2051363:2100891210089121026631773Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein2e-1481.3
NC_017986:5867782:5871609587160958738822274Pseudomonas putida ND6 chromosome, complete genomehypothetical protein4e-1480.1
NC_004547:1174650:118239111823911182576186Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein2e-1378.2
NC_020054:4848000:4871719487171948739592241Fibrella aestuarina BUZ 2 drat genomePhage T7 exclusion protein2e-1274.3
NC_014370:885937:9085059085059109282424Prevotella melaninogenica ATCC 25845 chromosome chromosome I,KAP family P-loop domain protein1e-1068.9
NC_006138:1735723:1761715176171517640002286Desulfotalea psychrophila LSv54, complete genomehypothetical protein2e-1067.8
NC_014002:1308458:1330006133000613322642259Methanohalophilus mahii DSM 5219 chromosome, complete genomeKAP P-loop domain protein1e-0965.1
NC_015145:1045264:1068972106897210710802109Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genomeKAP family P-loop domain protein1e-0862.4
NC_012483:1841000:1860106186010618623912286Acidobacterium capsulatum ATCC 51196, complete genomeKAP family P-loop domain protein2e-0860.8
NC_015164:493159:5414145414145440082595Bacteroides salanitronis DSM 18170 chromosome, complete genomeKAP P-loop domain-containing protein1e-0758.9
NC_011601:846358:8535858535858551021518Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomehypothetical protein1e-0758.5
NC_015556:515641:5255045255045268591356Pseudomonas fulva 12-X chromosome, complete genomeKAP P-loop domain protein2e-0758.2
NC_012997:541648:5548685548685570242157Teredinibacter turnerae T7901, complete genomeKAP family P-loop domain protein2e-0758.2
NC_007912:4579873:4590155459015545926472493Saccharophagus degradans 2-40, complete genomePutative oxygen-independent coproporphyrinogen III oxidase2e-0757.8
NC_006138:1735723:1743785174378517452331449Desulfotalea psychrophila LSv54, complete genomehypothetical protein2e-0757.8
NC_009138:2242470:224749722474972248285789Herminiimonas arsenicoxydans, complete genomehypothetical protein3e-0757.4
NC_015690:1186545:1234984123498412370592076Paenibacillus mucilaginosus KNP414 chromosome, complete genomePifA7e-0756.2
NC_009665:3984080:3999495399949540008861392Shewanella baltica OS185 chromosome, complete genomeKAP P-loop domain-containing protein2e-0654.7
NC_013956:4490000:4500366450036645019191554Pantoea ananatis LMG 20103 chromosome, complete genomehypothetical protein4e-0653.5