Pre_GI: BLASTP Hits

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Query: NC_013716:5201097:5257052 Citrobacter rodentium ICC168, complete genome

Start: 5257052, End: 5258668, Length: 1617

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011742:4655373:4660479466047946620771599Escherichia coli S88 chromosome, complete genomehypothetical protein4e-175614
NC_008563:4739333:4745961474596147474151455Escherichia coli APEC O1, complete genomehypothetical protein4e-175614
NC_013941:3300000:3329451332945133306951245Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein8e-97354
NC_013008:3525428:3550716355071635519241209Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein8e-97354
NC_002695:3468873:3491695349169534929631269Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein8e-97354
NC_009792:3245368:3280853328085332822231371Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein5e-96352
NC_002655:3538656:355933835593383560246909Escherichia coli O157:H7 EDL933, complete genomehypothetical protein1e-94347
NC_014562:2563466:2589710258971025908671158Pantoea vagans C9-1 chromosome, complete genomehypothetical protein4e-78292
NC_011353:3573641:3595841359584135970551215Escherichia coli O157:H7 str. EC4115 chromosome, complete genomehypothetical protein8e-75281
NC_004431:4270305:430243343024334302867435Escherichia coli CFT073, complete genome2e-60234
NC_004431:4270305:430157443015744302017444Escherichia coli CFT073, complete genome3e-1790.1
NC_012667:1045782:1056197105619710574501254Vibrio cholerae MJ-1236 chromosome 2, complete genomehypothetical protein2e-1067.8
NC_002506:298868:3029263029263041491224Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, completehypothetical protein2e-1067.8
NC_016945:300000:3029233029233041161194Vibrio cholerae IEC224 chromosome II, complete sequencehypothetical protein2e-1067.8
NC_016446:26500:2935329353305941242Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, completehypothetical protein2e-1067.8
NC_012580:301500:3041133041133053481236Vibrio cholerae M66-2 chromosome II, complete sequencehypothetical protein6e-1066.2
NC_012583:335000:3377893377893390181230Vibrio cholerae O395 chromosome chromosome II, complete sequencehypothetical protein6e-1066.2