Pre_GI: BLASTP Hits

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Query: NC_013716:5201097:5237388 Citrobacter rodentium ICC168, complete genome

Start: 5237388, End: 5237621, Length: 234

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004431:4270305:430485043048504305158309Escherichia coli CFT073, complete genomehypothetical protein4e-34143
NC_013364:1306756:132288613228861323119234Escherichia coli O111:H- str. 11128, complete genomehypothetical protein6e-34142
NC_013361:1335166:135130113513011351534234Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein6e-34142
NC_013008:1354988:137474113747411374974234Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein6e-34142
NC_002655:1103991:111903511190351119268234Escherichia coli O157:H7 EDL933, complete genomehypothetical protein6e-34142
NC_002695:1417912:143086914308691431102234Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein6e-34142
NC_011742:4655373:465818846581884658496309Escherichia coli S88 chromosome, complete genomehypothetical protein9e-34142