Pre_GI: BLASTP Hits

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Query: NC_013716:5201097:5233478 Citrobacter rodentium ICC168, complete genome

Start: 5233478, End: 5234047, Length: 570

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013353:2455052:247193524719352472504570Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein3e-91333
AP010958:2455052:247193524719352472504570Escherichia coli O103:H2 str. 12009 DNA, complete genomehypothetical protein3e-91333
NC_011751:3453683:350750035075003508105606Escherichia coli UMN026 chromosome, complete genomehypothetical protein4e-91333
NC_004431:3409389:348439734843973484966570Escherichia coli CFT073, complete genomehypothetical protein5e-91333
NC_013353:3627355:365744336574433658012570Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein1e-90332
AP010958:3627355:365744336574433658012570Escherichia coli O103:H2 str. 12009 DNA, complete genomehypothetical protein1e-90332
CP002797:2062006:208273220827322083301570Escherichia coli NA114, complete genomehypothetical protein2e-90331
NC_011083:4547825:457460345746034575334732Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,hypothetical protein4e-41167
NC_008253:4817864:482665248266524827383732Escherichia coli 536, complete genomehypothetical protein3e-41167
NC_007946:4875997:488615448861544886885732Escherichia coli UTI89, complete genomehypothetical protein3e-41167
NC_011742:3245500:326203032620303262770741Escherichia coli S88 chromosome, complete genomehypothetical protein1e-40166
NC_008563:3332114:334723833472383347978741Escherichia coli APEC O1, complete genomehypothetical protein1e-40166
CP002797:4656327:465914946591494659889741Escherichia coli NA114, complete genomehypothetical protein1e-40166
NC_020418:116500:136581136581137168588Morganella morganii subsp. morganii KT, complete genometransposase1e-40166
NC_011750:4390000:440299944029994403730732Escherichia coli IAI39 chromosome, complete genomehypothetical protein3e-40164
NC_004431:4319152:433086843308684331599732Escherichia coli CFT073, complete genomehypothetical protein3e-39161
NC_011745:3405520:341584334158433416574732Escherichia coli ED1a chromosome, complete genomehypothetical protein4e-39160
NC_008563:4707826:471722247172224717953732Escherichia coli APEC O1, complete genomehypothetical protein4e-39160
NC_012912:1053618:107241210724121073035624Dickeya zeae Ech1591, complete genomeCP4-57 prophage; hypothetical protein2e-34145
NC_013421:1505176:151089815108981511509612Pectobacterium wasabiae WPP163, complete genomehypothetical protein8e-34143
CP002185:4750571:477035247703524770966615Escherichia coli W, complete genomehypothetical protein1e-32139
CP002516:4236680:424190342419034242517615Escherichia coli KO11, complete genomehypothetical protein1e-32139
NC_016902:4236680:424190342419034242517615Escherichia coli KO11FL chromosome, complete genomehypothetical protein1e-32139
NC_010634:1342393:135022813502281350812585Yersinia pseudotuberculosis PB1/+, complete genomehypothetical protein1e-32139
NC_005139:796546:806984806984807628645Vibrio vulnificus YJ016 chromosome I, complete sequencehypothetical protein1e-32139
NC_009708:915814:924077924077924703627Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein7e-33139
NC_009708:915814:921173921173921802630Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein2e-31134
NC_015761:299386:308796308796309416621Salmonella bongori NCTC 12419, complete genomeprophage protein1e-30132
NC_009832:1946401:195677919567791957375597Serratia proteamaculans 568, complete genomehypothetical protein2e-30132
NC_013592:446092:463175463175463804630Dickeya dadantii Ech586, complete genomehypothetical protein5e-30130
NC_020181:5130513:514061751406175141201585Enterobacter aerogenes EA1509E, complete genomeFIG00947185: hypothetical protein8e-30129
NC_009092:1441813:145080814508081451473666Shewanella loihica PV-4, complete genometransposase2e-27122
NC_012691:1250385:127024212702421270910669Tolumonas auensis DSM 9187, complete genomehypothetical protein2e-27121
NC_020064:3609844:362956736295673630199633Serratia marcescens FGI94, complete genomeProtein of unknown function (DUF3296)6e-27120
NC_010473:247429:267096267096267722627Escherichia coli str. K-12 substr. DH10B, complete genomeCP4-6 prophage; conserved protein3e-26117
NC_000913:272071:291546291546292172627Escherichia coli K12, complete genomeCP4-6 prophage; conserved protein3e-26117
AC_000091:273325:291546291546292172627Escherichia coli W3110 DNA, complete genomehypothetical protein3e-26117
NC_000913:2746886:275856927585692759195627Escherichia coli K12, complete genomeCP4-57 prophage; predicted protein8e-26116
AC_000091:2747520:275920327592032759829627Escherichia coli W3110 DNA, complete genomehypothetical protein8e-26116
NC_010473:2839902:285033428503342850960627Escherichia coli str. K-12 substr. DH10B, complete genomeCP4-57 prophage; predicted protein8e-26116
NC_012759:2633949:264438126443812645007627Escherichia coli BW2952 chromosome, complete genomeCP4-57 prophage protein8e-26116
NC_010322:5293652:531395953139595314558600Pseudomonas putida GB-1 chromosome, complete genometransposase4e-24110
NC_015379:908904:935764935764936426663Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Hypothetical protein; putative prophage5e-24110
NC_012691:2476223:249796124979612498647687Tolumonas auensis DSM 9187, complete genomehypothetical protein1e-21102
NC_008577:2115440:212463021246302125307678Shewanella sp. ANA-3 chromosome 1, complete sequencehypothetical protein1e-21102
NC_014618:690056:703227703227703925699Enterobacter cloacae SCF1 chromosome, complete genomehypothetical protein2e-21102
NC_008322:2077628:208846620884662089143678Shewanella sp. MR-7, complete genomehypothetical protein5e-21100
NC_018691:3525430:356448435644843565281798Alcanivorax dieselolei B5 chromosome, complete genomeConserved prophage protein1e-2099.4
NC_013456:212150:228379228379229041663Vibrio sp. Ex25 chromosome 1, complete genomehypothetical protein1e-2099
NC_009901:1516340:152731215273121527938627Shewanella pealeana ATCC 700345, complete genometransposase2e-1995.5
NC_011274:311843:329893329893330726834Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein6e-1890.5
NC_008321:1993541:200569020056902006352663Shewanella sp. MR-4, complete genomehypothetical protein5e-1684.3
NC_016944:514742:528313528313528957645Vibrio cholerae IEC224 chromosome I, complete sequencehypothetical protein7e-1683.6
NC_002505:514732:528305528305528949645Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completehypothetical protein7e-1683.6
NC_004431:279868:287635287635288201567Escherichia coli CFT073, complete genomehypothetical protein4e-1477.8
NC_015663:1869000:187942718794271879816390Enterobacter aerogenes KCTC 2190 chromosome, complete genomehypothetical protein8e-1476.6
NC_008253:3122148:315383631538363154369534Escherichia coli 536, complete genomehypothetical protein7e-1270.1
NC_018678:2382708:238932323893232390021699Alteromonas macleodii str. 'English Channel 673' chromosome,prophage3e-0858.2
NC_016944:514742:529019529019529693675Vibrio cholerae IEC224 chromosome I, complete sequencehypothetical protein2e-0755.8
NC_012668:83641:906549065491328675Vibrio cholerae MJ-1236 chromosome 1, complete sequencehypothetical protein2e-0755.8
NC_002505:514732:529011529011529685675Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completehypothetical protein2e-0755.8