Pre_GI: BLASTP Hits

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Query: NC_013716:5201097:5233071 Citrobacter rodentium ICC168, complete genome

Start: 5233071, End: 5233316, Length: 246

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013941:3676146:370639737063973706591195Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein2e-0960.8
NC_013353:3627355:365821236582123658406195Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein2e-0960.8
AP010958:3627355:365821236582123658406195Escherichia coli O103:H2 str. 12009 DNA, complete genomehypothetical protein2e-0960.8
CP002797:4603787:462082846208284621028201Escherichia coli NA114, complete genomeHypothetical protein3e-0960.5