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Query: NC_013716:5201097:5228535 Citrobacter rodentium ICC168, complete genome

Start: 5228535, End: 5229539, Length: 1005

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004337:3049118:3085141308514130861601020Shigella flexneri 2a str. 301, complete genomehypothetical protein0652
NC_004741:3041294:3075971307597130769901020Shigella flexneri 2a str. 2457T, complete genomehypothetical protein0652
NC_017328:3088907:312484531248453125819975Shigella flexneri 2002017 chromosome, complete genomehypothetical protein3e-178624
NC_016612:2009927:2040967204096720420551089Klebsiella oxytoca KCTC 1686 chromosome, complete genomehypothetical protein9e-2097.8
CP002516:4236680:424035742403574241310954Escherichia coli KO11, complete genomehypothetical protein1e-1480.9
CP002185:4750571:477155947715594772512954Escherichia coli W, complete genomehypothetical protein1e-1480.9
NC_016902:4236680:424035742403574241310954Escherichia coli KO11FL chromosome, complete genomehypothetical protein1e-1480.9
NC_015663:1:2777627776288731098Enterobacter aerogenes KCTC 2190 chromosome, complete genomehypothetical protein2e-1170.1
NC_016612:443398:461468461468462382915Klebsiella oxytoca KCTC 1686 chromosome, complete genomehypothetical protein2e-0757
NC_015424:3520783:3557553355755335585871035Aeromonas veronii B565 chromosome, complete genomehypothetical protein3e-0652.8