Pre_GI: BLASTP Hits

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Query: NC_013716:5201097:5222613 Citrobacter rodentium ICC168, complete genome

Start: 5222613, End: 5223098, Length: 486

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008253:334467:356951356951357436486Escherichia coli 536, complete genomepossible anti-restriction protein2e-80297
NC_004431:4319152:433826543382654338750486Escherichia coli CFT073, complete genomeHypothetical protein yfjX2e-79294
NC_011083:4547825:456746445674644567943480Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,antirestriction protein7e-79292
NC_007946:4875997:489352248935224894007486Escherichia coli UTI89, complete genomehypothetical protein2e-78290
NC_007946:1119000:113791811379181138463546Escherichia coli UTI89, complete genomehypothetical protein YafX2e-77287
NC_008253:3161311:317295931729593173444486Escherichia coli 536, complete genomehypothetical protein YfjX (possible anti-restriction protein)2e-76284
NC_011745:5114500:511538051153805115865486Escherichia coli ED1a chromosome, complete genomeputative antirestriction protein (klcA-like)3e-76283
NC_011745:3405520:342318234231823423667486Escherichia coli ED1a chromosome, complete genomeputative antirestriction protein (klcA-like)7e-76282
NC_013361:3313284:332971733297173330202486Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein9e-76281
NC_008253:4817864:483406248340624834505444Escherichia coli 536, complete genomehypothetical protein2e-75280
AP010958:3669500:367058736705873671072486Escherichia coli O103:H2 str. 12009 DNA, complete genomehypothetical protein2e-73274
NC_011750:4775770:477626147762614776746486Escherichia coli IAI39 chromosome, complete genomeputative antirestriction protein2e-73274
NC_011750:4390000:441135344113534411904552Escherichia coli IAI39 chromosome, complete genomeputative antirestriction protein2e-73274
NC_013353:3669500:367058736705873671072486Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein2e-73274
NC_017328:3088907:313497031349703135515546Shigella flexneri 2002017 chromosome, complete genomehypothetical protein1e-72271
NC_004741:3041294:308616430861643086637474Shigella flexneri 2a str. 2457T, complete genomehypothetical protein3e-72270
NC_004337:3049118:309533730953373095810474Shigella flexneri 2a str. 301, complete genomehypothetical protein3e-72270
NC_009801:4882684:488384448838444884317474Escherichia coli E24377A, complete genomeantirestriction protein3e-72270
NC_020181:5130513:513345751334575134008552Enterobacter aerogenes EA1509E, complete genomeAntirestriction protein klcA5e-60229
NC_012759:2633949:265975326597532660211459Escherichia coli BW2952 chromosome, complete genomeCP4-57 prophage; putative antirestriction protein3e-57220
NC_010473:2839902:286570628657062866164459Escherichia coli str. K-12 substr. DH10B, complete genomeCP4-57 prophage; predicted antirestriction protein3e-57220
NC_000913:2746886:277394127739412774399459Escherichia coli K12, complete genomeCP4-57 prophage; predicted antirestriction protein3e-57220
AC_000091:2747520:277457527745752775033459Escherichia coli W3110 DNA, complete genomepredicted antirestriction protein3e-57220
NC_016612:443398:456388456388456831444Klebsiella oxytoca KCTC 1686 chromosome, complete genomehypothetical protein6e-57219
NC_011283:4966471:498501649850164985459444Klebsiella pneumoniae 342 chromosome, complete genomeantirestriction protein1e-56218
NC_014618:4114004:412067741206774121135459Enterobacter cloacae SCF1 chromosome, complete genomeantirestriction protein9e-56215
NC_016816:1137904:115013711501371150580444Pantoea ananatis LMG 5342, complete genomeantirestriction protein KlcA2e-55214
NC_011415:308825:326258326258326701444Escherichia coli SE11 chromosome, complete genomehypothetical protein2e-55214
NC_015663:549425:563451563451563933483Enterobacter aerogenes KCTC 2190 chromosome, complete genomeantirestriction protein5e-55213
NC_020064:3609844:363365836336583634101444Serratia marcescens FGI94, complete genomeAntirestriction protein8e-55212
NC_014618:690056:722784722784723242459Enterobacter cloacae SCF1 chromosome, complete genomeantirestriction protein1e-54211
NC_013353:5272863:528831952883195288762444Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein2e-54211
AP010958:5272863:528831952883195288762444Escherichia coli O103:H2 str. 12009 DNA, complete genomehypothetical protein2e-54211
NC_010498:301000:316666316666317124459Escherichia coli SMS-3-5, complete genomeantirestriction protein2e-54210
NC_014121:3776902:379175537917553792213459Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein1e-53208
NC_020260:882307:894452894452894910459Cronobacter sakazakii Sp291, complete genomehypothetical protein1e-53208
NC_016612:2009927:204450420445042044950447Klebsiella oxytoca KCTC 1686 chromosome, complete genomeantirestriction protein3e-53206
NC_009832:1946401:194895619489561949414459Serratia proteamaculans 568, complete genomeAntirestriction protein1e-46184
NC_015663:1:322223222232515294Enterobacter aerogenes KCTC 2190 chromosome, complete genomeantirestriction protein1e-30132
NC_020418:116500:133892133892134317426Morganella morganii subsp. morganii KT, complete genomehypothetical protein7e-30129
NC_010170:4800000:480770448077044808117414Bordetella petrii, complete genomehypothetical protein yfjX1e-1169.3
NC_015663:1869000:187050918705091871129621Enterobacter aerogenes KCTC 2190 chromosome, complete genomehypothetical protein2e-0961.6
NC_016845:4498097:450766945076694508067399Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein1e-0858.9
NC_009668:445134:499390499390499812423Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequenceantirestriction protein9e-0855.8
NC_011747:11532:340733407334519447Escherichia coli S88 plasmid pECOS88, complete sequenceputative antirestriction protein7e-0753.1
NC_010488:48868:495114951149936426Escherichia coli SMS-3-5 plasmid pSMS35_130, complete sequenceputative antirestriction protein8e-0752.8