Pre_GI: BLASTP Hits

Some Help

Query: NC_013716:5201097:5221837 Citrobacter rodentium ICC168, complete genome

Start: 5221837, End: 5222058, Length: 222

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013361:3313284:333075733307573330978222Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein5e-38156
NC_004431:4319152:433930443393044339525222Escherichia coli CFT073, complete genomeHypothetical protein yeeT1e-37154
NC_013361:5580741:558128055812805581501222Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein6e-37152
NC_009801:4882684:488487248848724885093222Escherichia coli E24377A, complete genomehypothetical protein6e-37152
NC_007946:1119000:113901811390181139239222Escherichia coli UTI89, complete genomehypothetical protein YeeT2e-36151
NC_011745:3405520:342422234242223424443222Escherichia coli ED1a chromosome, complete genomehypothetical protein2e-36150
NC_011083:4547825:456666545666654566886222Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,hypothetical protein2e-36150
AP010958:3669500:367163236716323671853222Escherichia coli O103:H2 str. 12009 DNA, complete genomehypothetical protein2e-36150
NC_013353:3669500:367163236716323671853222Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein2e-36150
NC_011745:5114500:511642051164205116641222Escherichia coli ED1a chromosome, complete genomehypothetical protein2e-36150
NC_008253:3161311:317400531740053174226222Escherichia coli 536, complete genomehypothetical protein YeeT2e-36150
NC_008253:334467:357997357997358218222Escherichia coli 536, complete genomehypothetical protein YeeT2e-36150
NC_004741:3041294:308721630872163087437222Shigella flexneri 2a str. 2457T, complete genomehypothetical protein1e-35147
NC_007946:4875997:489458548945854894806222Escherichia coli UTI89, complete genomehypothetical protein YeeT1e-35147
NC_011750:4390000:441248344124834412704222Escherichia coli IAI39 chromosome, complete genomehypothetical protein1e-35147
NC_008253:4817864:483508348350834835304222Escherichia coli 536, complete genomehypothetical protein YeeT1e-35147
NC_004337:3049118:309638930963893096610222Shigella flexneri 2a str. 301, complete genomehypothetical protein1e-35147
NC_017328:3088907:313609431360943136315222Shigella flexneri 2002017 chromosome, complete genomeYeeT1e-35147
NC_020181:5130513:513272451327245132945222Enterobacter aerogenes EA1509E, complete genomeYeeT7e-24108
NC_016612:443398:455615455615455836222Klebsiella oxytoca KCTC 1686 chromosome, complete genomehypothetical protein3e-23107
NC_015663:549425:562728562728562949222Enterobacter aerogenes KCTC 2190 chromosome, complete genomehypothetical protein8e-23105
NC_014618:4114004:411995641199564120177222Enterobacter cloacae SCF1 chromosome, complete genomehypothetical protein8e-23105
NC_020260:603796:619596619596619817222Cronobacter sakazakii Sp291, complete genomehypothetical protein4e-22103
NC_016816:1137904:114936411493641149585222Pantoea ananatis LMG 5342, complete genomehypothetical protein4e-22103
NC_020064:3609844:363465336346533634874222Serratia marcescens FGI94, complete genomeProtein of unknown function (DUF987)7e-22102
NC_014618:690056:723742723742723963222Enterobacter cloacae SCF1 chromosome, complete genomehypothetical protein1e-21101
NC_011283:4966471:498424349842434984464222Klebsiella pneumoniae 342 chromosome, complete genomehypothetical protein2e-21101
NC_010498:301000:317624317624317845222Escherichia coli SMS-3-5, complete genomehypothetical protein2e-21101
NC_014121:3776902:379271437927143792941228Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein3e-21100
NC_020260:882307:893724893724893951228Cronobacter sakazakii Sp291, complete genomehypothetical protein3e-21100
NC_016902:44744:484804848048701222Escherichia coli KO11FL chromosome, complete genomehypothetical protein6e-1992.8
CP002185:4035502:405737240573724057593222Escherichia coli W, complete genomeconserved hypothetical protein6e-1992.8
CP002516:44744:484804848048701222Escherichia coli KO11, complete genomeprotein of unknown function DUF9876e-1992.8
NC_009436:522649:542424542424542618195Enterobacter sp. 638, complete genomehypothetical protein2e-1788.2
NC_012759:2633949:266071126607112660911201Escherichia coli BW2952 chromosome, complete genomehypothetical protein2e-1684.3
NC_010473:2839902:286666428666642866864201Escherichia coli str. K-12 substr. DH10B, complete genomehypothetical protein2e-1684.3
AC_000091:2747520:277553327755332775733201Escherichia coli W3110 DNA, complete genomehypothetical protein2e-1684.3
NC_000913:2746886:277489927748992775099201Escherichia coli K12, complete genomehypothetical protein2e-1684.3