Pre_GI: BLASTP Hits

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Query: NC_013716:5201097:5221174 Citrobacter rodentium ICC168, complete genome

Start: 5221174, End: 5221818, Length: 645

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011083:4547825:456599945659994566646648Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,hypothetical protein5e-114409
NC_007946:1119000:113925811392581139902645Escherichia coli UTI89, complete genomehypothetical protein9e-114409
NC_009668:445134:497929497929498573645Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequencehypothetical protein3e-68257
NC_013132:3959258:398327839832783983922645Chitinophaga pinensis DSM 2588, complete genomehypothetical protein4e-1477.8
NC_013361:5580741:558150155815015581614114Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein4e-0858.2
NC_011745:5114500:511664151166415116754114Escherichia coli ED1a chromosome, complete genomehypothetical protein4e-0858.2
NC_009801:4882684:488509348850934885206114Escherichia coli E24377A, complete genomehypothetical protein6e-0754.3
NC_011745:3405520:342444334244433424556114Escherichia coli ED1a chromosome, complete genomehypothetical protein9e-0650.4