Pre_GI: BLASTP Hits

Some Help

Query: NC_013716:5201097:5220290 Citrobacter rodentium ICC168, complete genome

Start: 5220290, End: 5220667, Length: 378

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008253:3161311:317475831747583175135378Escherichia coli 536, complete genomehypothetical protein YeeV8e-65244
NC_011083:4547825:456511445651144565491378Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,hypothetical protein8e-65244
NC_013361:5580741:558212255821225582496375Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein1e-64244
NC_011745:5114500:511726251172625117636375Escherichia coli ED1a chromosome, complete genometoxin of the YeeV-YeeU toxin-antitoxin system; CP4-44 prophage1e-64244
NC_011745:3405520:342506434250643425438375Escherichia coli ED1a chromosome, complete genometoxin of the YeeV-YeeU toxin-antitoxin system; CP4-44 prophage1e-64244
NC_007946:1119000:114037611403761140750375Escherichia coli UTI89, complete genomeunknown protein encoded within prophage CP-933L1e-64244
NC_002655:4653160:465278946527894653163375Escherichia coli O157:H7 EDL933, complete genomeunknown protein encoded within prophage CP-933L1e-63241
NC_002695:4584177:458380645838064584180375Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein1e-63241
NC_013941:4470932:447374844737484474122375Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein1e-63241
NC_008253:334467:358839358839359216378Escherichia coli 536, complete genomehypothetical protein YeeV7e-64241
NC_017328:3088907:313681931368193137196378Shigella flexneri 2002017 chromosome, complete genomehypothetical protein2e-63240
NC_004337:3049118:309711430971143097491378Shigella flexneri 2a str. 301, complete genomehypothetical protein2e-63240
NC_004741:3041294:308794130879413088318378Shigella flexneri 2a str. 2457T, complete genomehypothetical protein2e-63240
NC_008253:4817864:483584248358424836219378Escherichia coli 536, complete genomehypothetical protein1e-62238
NC_007946:4875997:489534448953444895721378Escherichia coli UTI89, complete genomehypothetical protein1e-62238
NC_009801:4882684:488571448857144886088375Escherichia coli E24377A, complete genomehypothetical protein1e-62237
NC_004431:4319152:434005943400594340436378Escherichia coli CFT073, complete genomeHypothetical protein yeeV2e-61234
NC_013353:3669500:367234936723493672726378Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein1e-60231
AP010958:3669500:367234936723493672726378Escherichia coli O103:H2 str. 12009 DNA, complete genomehypothetical protein1e-60231
NC_011750:4390000:441324144132414413618378Escherichia coli IAI39 chromosome, complete genometoxin of the YeeV-YeeU toxin-antitoxin system; CP4-44 prophage7e-59225
NC_012967:3769499:379410637941063794471366Escherichia coli B str. REL606 chromosome, complete genomehypothetical protein2e-56216
NC_012947:44512:499664996650331366Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completehypothetical protein2e-56216
NC_015224:4386599:440497644049764405344369Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,hypothetical protein2e-35147
NC_009832:1946401:194766419476641948032369Serratia proteamaculans 568, complete genomeprotein of unknown function DUF12192e-35147
NC_011415:308825:327629327629327994366Escherichia coli SE11 chromosome, complete genomehypothetical protein4e-35146
NC_012759:2633949:266128726612872661616330Escherichia coli BW2952 chromosome, complete genomeCP4-57 prophage; toxin of the YpjF-YfjZ toxin-antitoxin system1e-33141
NC_010473:2839902:286724028672402867569330Escherichia coli str. K-12 substr. DH10B, complete genomeCP4-57 prophage; toxin of the YpjF-YfjZ toxin-antitoxin system1e-33141
AC_000091:2747520:277610927761092776438330Escherichia coli W3110 DNA, complete genometoxin of the YpjF-YfjZ toxin-antitoxin system1e-33141
NC_000913:2746886:277547527754752775804330Escherichia coli K12, complete genomeCP4-57 prophage; toxin of the YpjF-YfjZ toxin-antitoxin system1e-33141
NC_016612:443398:454889454889455212324Klebsiella oxytoca KCTC 1686 chromosome, complete genometoxin of the YpjF-YfjZ toxin-antitoxin system3e-33140
NC_020260:882307:893046893046893372327Cronobacter sakazakii Sp291, complete genomehypothetical protein5e-33139
NC_014618:690056:724320724320724661342Enterobacter cloacae SCF1 chromosome, complete genomehypothetical protein1e-32138
NC_012917:3241196:326688332668833267203321Pectobacterium carotovorum subsp. carotovorum PC1, complete genomehypothetical protein2e-32137
NC_013353:5272863:528996552899655290336372Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein3e-32136
AP010958:5272863:528996552899655290336372Escherichia coli O103:H2 str. 12009 DNA, complete genomehypothetical protein3e-32136
NC_016902:4236680:423809342380934238434342Escherichia coli KO11FL chromosome, complete genomehypothetical protein4e-32136
CP002516:4236680:423809342380934238434342Escherichia coli KO11, complete genomeprotein of unknown function DUF12194e-32136
NC_016816:1137904:114860511486051148934330Pantoea ananatis LMG 5342, complete genomeCP4-57 prophage7e-31132
NC_014618:4114004:411930441193044119600297Enterobacter cloacae SCF1 chromosome, complete genomehypothetical protein5e-30129
NC_020064:3609844:363530536353053635634330Serratia marcescens FGI94, complete genomeProtein of unknown function (DUF1219)1e-29128
NC_013592:3263005:327709432770943277447354Dickeya dadantii Ech586, complete genomeprotein of unknown function DUF12195e-29126
NC_015761:299386:323231323231323572342Salmonella bongori NCTC 12419, complete genomeprophage protein8e-29125
NC_020063:4127161:413165941316594131979321Enterobacteriaceae bacterium strain FGI 57, complete genomeProtein of unknown function (DUF1219)8e-29125
NC_015663:1356982:137870813787081379028321Enterobacter aerogenes KCTC 2190 chromosome, complete genomeCP4-57 prophage; toxin of the YpjF-YfjZ toxin-antitoxin system7e-28122
NC_012912:1053618:108316310831631083477315Dickeya zeae Ech1591, complete genomeprotein of unknown function DUF12193e-27120
NC_020260:603796:618890618890619219330Cronobacter sakazakii Sp291, complete genomehypothetical protein3e-27120
NC_013961:441719:467060467060467380321Erwinia amylovora, complete genomeUncharacterized protein ykfI5e-27119
NC_013971:3296272:330392033039203304240321Erwinia amylovora ATCC 49946 chromosome, complete genomehypothetical protein5e-27119
NC_012912:4167429:418008441800844180398315Dickeya zeae Ech1591, complete genomeprotein of unknown function DUF12194e-27119
NC_020181:5130513:513197551319755132304330Enterobacter aerogenes EA1509E, complete genomeYpjF toxin protein1e-26118
NC_009436:522649:542994542994543314321Enterobacter sp. 638, complete genomehypothetical protein2e-26117
NC_014121:3776902:379336237933623793619258Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative toxin module of toxin-antitoxin system7e-24109
CP002185:4035502:405802440580244058344321Escherichia coli W, complete genomehypothetical protein2e-23107
CP002516:44744:477294772948049321Escherichia coli KO11, complete genomeprotein of unknown function DUF12192e-23107
NC_016902:44744:477294772948049321Escherichia coli KO11FL chromosome, complete genomehypothetical protein2e-23107
NC_015663:549425:562064562064562345282Enterobacter aerogenes KCTC 2190 chromosome, complete genomehypothetical protein2e-1891.3
NC_012962:3864000:3870561387056138724111851Photorhabdus asymbiotica, complete genomehypothetical protein4e-0856.6
NC_016832:4425330:4439548443954844414971950Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein4e-0753.5
NC_012125:4536383:4550636455063645525851950Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein4e-0753.5
NC_003198:4453457:4467675446767544696241950Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein4e-0753.5
NC_009832:4482500:449768344976834497955273Serratia proteamaculans 568, complete genomehypothetical protein8e-0649.3