Pre_GI: BLASTP Hits

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Query: NC_013716:5201097:5219805 Citrobacter rodentium ICC168, complete genome

Start: 5219805, End: 5220293, Length: 489

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007946:1119000:114075011407501141238489Escherichia coli UTI89, complete genomehypothetical protein2e-87320
NC_013941:4470932:447411944741194474610492Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein2e-83307
NC_002655:4653160:465316046531604653651492Escherichia coli O157:H7 EDL933, complete genomeunknown protein encoded within prophage CP-933L2e-83307
NC_002695:4584177:458417745841774584668492Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein2e-83307
NC_009801:4882684:488608548860854886576492Escherichia coli E24377A, complete genomehypothetical protein3e-83306
NC_008253:334467:359213359213359701489Escherichia coli 536, complete genomehypothetical protein4e-81300
NC_007946:4875997:489571848957184896206489Escherichia coli UTI89, complete genomehypothetical protein3e-81300
NC_011083:4547825:456462945646294565117489Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,hypothetical protein2e-80297
NC_013361:5580741:558249355824935582981489Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein2e-76283
NC_011745:5114500:511763351176335118121489Escherichia coli ED1a chromosome, complete genomehypothetical protein2e-76283
NC_008253:3161311:317513231751323175620489Escherichia coli 536, complete genomehypothetical protein1e-75281
NC_011745:3405520:342543534254353425923489Escherichia coli ED1a chromosome, complete genomehypothetical protein4e-75279
NC_004741:3041294:308831530883153088803489Shigella flexneri 2a str. 2457T, complete genomehypothetical protein1e-72271
NC_004337:3049118:309748830974883097976489Shigella flexneri 2a str. 301, complete genomehypothetical protein1e-72271
NC_017328:3088907:313719331371933137681489Shigella flexneri 2002017 chromosome, complete genomehypothetical protein1e-72271
NC_012967:3769499:379446837944683794956489Escherichia coli B str. REL606 chromosome, complete genomehypothetical protein5e-72269
NC_012947:44512:494814948149969489Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completehypothetical protein5e-72269
NC_013353:3669500:367272336727233673211489Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein1e-71268
AP010958:3669500:367272336727233673211489Escherichia coli O103:H2 str. 12009 DNA, complete genomehypothetical protein1e-71268
NC_008253:4817864:483627048362704836704435Escherichia coli 536, complete genomehypothetical protein6e-71266
NC_013592:3263005:327744432774443277779336Dickeya dadantii Ech586, complete genomehypothetical protein2e-31134
NC_009832:1946401:194733819473381947667330Serratia proteamaculans 568, complete genomehypothetical protein1e-30132
NC_011750:4390000:441361544136154414037423Escherichia coli IAI39 chromosome, complete genomehypothetical protein2e-1994.7
NC_004431:4319152:434043343404334340855423Escherichia coli CFT073, complete genomehypothetical protein2e-1788.2
NC_008563:4707826:470782647078264708248423Escherichia coli APEC O1, complete genomehypothetical protein3e-1684
NC_014304:77715:777157771578026312Erwinia billingiae Eb661 plasmid pEB102, complete sequencehypothetical protein2e-1478.2