Pre_GI: BLASTP Hits

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Query: NC_013716:5201097:5217038 Citrobacter rodentium ICC168, complete genome

Start: 5217038, End: 5217226, Length: 189

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010067:3204682:321061132106113210832222Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-22104
NC_003198:4513900:453731245373124537533222Salmonella enterica subsp. enterica serovar Typhi str. CT18,transcriptional regulatory protein6e-22102
NC_013421:701005:750806750806751027222Pectobacterium wasabiae WPP163, complete genomeputative transcriptional regulator, Nlp8e-2095.5
NC_014500:1066911:108564110856411085868228Dickeya dadantii 3937 chromosome, complete genomeputative regulator for maltose metabolism2e-1994.7
NC_013592:956829:975937975937976158222Dickeya dadantii Ech586, complete genomeputative transcriptional regulator, Nlp2e-1994.7
NC_014500:894136:906023906023906268246Dickeya dadantii 3937 chromosome, complete genometranscriptional regulator2e-1890.9
NC_014618:4114004:411814141181414118395255Enterobacter cloacae SCF1 chromosome, complete genometranscriptional regulator Nlp2e-1890.9
NC_012917:3378759:338411533841153384330216Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeputative transcriptional regulator, Nlp8e-1889
NC_004088:1265730:128054012805401280842303Yersinia pestis KIM, complete genomeregulator1e-1788.6
NC_005810:1230976:123355212335521233854303Yersinia pestis biovar Microtus str. 91001, complete genomeputative regulator1e-1788.6
NC_017168:2626996:264186326418632642108246Yersinia pestis A1122 chromosome, complete genomeputative regulator1e-1788.6
NC_003143:3115933:312031631203163120561246Yersinia pestis CO92, complete genomeputative DNA-binding protein1e-1788.6
NC_008150:2822689:282658828265882826833246Yersinia pestis Antiqua, complete genomeputative DNA-binding protein1e-1788.6
NC_008149:1195614:121048112104811210726246Yersinia pestis Nepal516, complete genomeDNA-binding protein1e-1788.6
NC_012880:3748665:377718637771863777431246Dickeya dadantii Ech703, complete genomeputative transcriptional regulator, Nlp1e-1788.6
NC_014500:3519722:353207735320773532292216Dickeya dadantii 3937 chromosome, complete genomeputative regulator for maltose metabolism2e-1787.8
NC_016845:4498097:451548245154824515733252Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,transcriptional regulator Nlp2e-1787.4
NC_004547:1062410:107489010748901075132243Erwinia carotovora subsp. atroseptica SCRI1043, complete genometranscriptional regulator3e-1787
NC_012880:3982383:399572939957293995977249Dickeya dadantii Ech703, complete genome5e-1786.7
NC_013282:551219:574205574205574480276Cronobacter turicensis, complete genomeSugar fermentation stimulation protein B7e-1785.9
NC_016845:4498097:451313245131324513392261Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,transcriptional regulator Nlp2e-1684.3
NC_012880:3915500:393652639365263936789264Dickeya dadantii Ech703, complete genomeputative transcriptional regulator, Nlp5e-1682.8
NC_020063:1051310:105732610573261057580255Enterobacteriaceae bacterium strain FGI 57, complete genomeputative transcriptional regulator7e-1682.4
NC_014228:3391500:342080434208043421088285Xenorhabdus nematophila ATCC 19061, complete genomesugar fermentation stimulation protein B (Ner-like protein)7e-1682.4
NC_013892:1483000:149894614989461499230285Xenorhabdus bovienii SS-2004 chromosome, complete genometranscriptional activator of maltose metabolism7e-1682.4
NC_013892:3278647:329793132979313298215285Xenorhabdus bovienii SS-2004 chromosome, complete genometranscriptional activator of maltose metabolism7e-1682.4
NC_016818:3887000:391724339172433917500258Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeputative transcriptional regulator1e-1582
NC_013421:1819036:184323518432351843615381Pectobacterium wasabiae WPP163, complete genomeputative transcriptional regulator, Nlp1e-1582
NC_012880:3748665:375661837566183756890273Dickeya dadantii Ech703, complete genomeputative transcriptional regulator, Nlp2e-1580.9
NC_014228:3282500:331666433166643316930267Xenorhabdus nematophila ATCC 19061, complete genomeSugar fermentation stimulation protein B (Ner-like protein)3e-1580.5
NC_014618:1103239:112429011242901124538249Enterobacter cloacae SCF1 chromosome, complete genometranscriptional regulator Nlp3e-1580.5
NC_020260:3355814:337700333770033377293291Cronobacter sakazakii Sp291, complete genomesugar fermentation stimulation protein B3e-1580.5
NC_003197:2870268:288882428888242889108285Salmonella typhimurium LT2, complete genomeputative cytoplasmic protein6e-1579.7
NC_009648:3224495:324306232430623243346285Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative cytoplasmic protein6e-1579.7
NC_011083:2847318:286333028633302863614285Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,regulator for maltose metabolism6e-1579.7
NC_016810:2871689:291139029113902911674285Salmonella enterica subsp. enterica serovar Typhimurium strregulator for maltose metabolism6e-1579.7
NC_016856:2896630:290904929090492909333285Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative cytoplasmic protein6e-1579.7
NC_016857:2871689:291139029113902911674285Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative cytoplasmic protein6e-1579.7
NC_016860:2896254:291239029123902912674285Salmonella enterica subsp. enterica serovar Typhimurium strmaltose metabolism regulator6e-1579.7
NC_016863:2844883:285730228573022857586285Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative cytoplasmic protein6e-1579.7
NC_017046:2896651:291013129101312910415285Salmonella enterica subsp. enterica serovar Typhimurium str. 798regulator for maltose metabolism6e-1579.7
NC_014228:3391500:339434533943453394614270Xenorhabdus nematophila ATCC 19061, complete genomeSugar fermentation stimulation protein B (Ner-like protein)6e-1579.3
NC_014228:3391500:340251634025163402776261Xenorhabdus nematophila ATCC 19061, complete genomesugar fermentation stimulation protein (Ner-like protein) (fragment)9e-1579
NC_014500:3097362:313990431399043140215312Dickeya dadantii 3937 chromosome, complete genomeputative regulator for maltose metabolism1e-1478.2
NC_005126:1265071:126667212666721266932261Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein2e-1477.8
NC_012912:1701231:173017617301761730448273Dickeya zeae Ech1591, complete genomeputative transcriptional regulator, Nlp4e-1477
NC_012917:4646491:465410646541064654363258Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeputative transcriptional regulator, Nlp5e-1476.3
NC_016818:859181:877253877253877534282Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeputative transcriptional regulator7e-1475.9
NC_014500:4691915:469834046983404698597258Dickeya dadantii 3937 chromosome, complete genomeputative regulator for maltose metabolism2e-1374.7
NC_014500:443874:462414462414462680267Dickeya dadantii 3937 chromosome, complete genomeputative regulator for maltose metabolism2e-1374.7
NC_012880:4117376:411737641173764117642267Dickeya dadantii Ech703, complete genomeputative transcriptional regulator, Nlp2e-1374.7
NC_012912:4194821:419513241951324195398267Dickeya zeae Ech1591, complete genomeputative transcriptional regulator, Nlp2e-1374.7
NC_012214:474359:492274492274492603330Erwinia pyrifoliae Ep1/96, complete genomesugar fermentation stimulation protein B2e-1374.3
NC_013592:4295449:429793042979304298196267Dickeya dadantii Ech586, complete genomeputative transcriptional regulator, Nlp2e-1374.3
NC_013592:4511478:453214945321494532406258Dickeya dadantii Ech586, complete genomeputative transcriptional regulator, Nlp3e-1373.9
NC_013961:441719:475545475545475874330Erwinia amylovora, complete genomeSugar fermentation stimulation protein B5e-1373.2
NC_012912:1701231:171672517167251717012288Dickeya zeae Ech1591, complete genomeputative transcriptional regulator, Nlp6e-1372.8
NC_014500:3097362:314118531411853141490306Dickeya dadantii 3937 chromosome, complete genomeputative regulator for maltose metabolism4e-1270.1
NC_014228:3282500:328505932850593285277219Xenorhabdus nematophila ATCC 19061, complete genomePutatiave helix-turn-helix regulatory protein2e-1064.7
NC_021066:3201500:321518432151843215456273Raoultella ornithinolytica B6, complete genomehypothetical protein5e-1063.2
NC_020063:2785652:279681027968102797070261Enterobacteriaceae bacterium strain FGI 57, complete genomeputative transcriptional regulator1e-0858.5