Pre_GI: BLASTP Hits

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Query: NC_013716:5201097:5216665 Citrobacter rodentium ICC168, complete genome

Start: 5216665, End: 5217015, Length: 351

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010067:3204682:321082932108293211290462Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-47187
NC_013421:701005:750348750348750809462Pectobacterium wasabiae WPP163, complete genomehypothetical protein6e-42169
NC_014618:1809369:182718418271841827648465Enterobacter cloacae SCF1 chromosome, complete genomehypothetical protein1e-34144
NC_010468:1816359:184090418409041841419516Escherichia coli ATCC 8739, complete genomehypothetical protein3e-33140
NC_014618:2705769:272017327201732720601429Enterobacter cloacae SCF1 chromosome, complete genomehypothetical protein5e-30129
NC_003198:4513900:453685445368544537315462Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein7e-27119
NC_016818:3887000:391749739174973917946450Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completehypothetical protein2e-23107
NC_020260:3004500:301155030115503012119570Cronobacter sakazakii Sp291, complete genomehypothetical protein4e-1270.1
NC_009778:2951207:296087429608742961338465Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein4e-1270.1
NC_013282:923500:934676934676935245570Cronobacter turicensis, complete genomehypothetical protein9e-1268.9
NC_016514:1183356:120236512023651202985621Enterobacter cloacae EcWSU1 chromosome, complete genomehypothetical protein8e-1165.9
NC_014121:2247913:226086822608682261323456Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein1e-1065.1
NC_014306:4901390:490778349077834908313531Erwinia billingiae Eb661, complete genomehypothetical protein1e-0962
NC_016816:674171:680772680772681302531Pantoea ananatis LMG 5342, complete genomehypothetical protein4e-0960.1