Pre_GI: BLASTP Hits

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Query: NC_013716:5201097:5209103 Citrobacter rodentium ICC168, complete genome

Start: 5209103, End: 5209732, Length: 630

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013353:3474077:350420935042093504838630Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein7e-117419
AP010958:3474077:350420935042093504838630Escherichia coli O103:H2 str. 12009 DNA, complete genomehypothetical protein7e-117419
NC_011283:785973:794134794134794766633Klebsiella pneumoniae 342 chromosome, complete genomehypothetical protein5e-111399
NC_013361:3867558:390116339011633901687525Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein2e-78291
NC_003198:3042000:305755030575503058080531Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein3e-73274
NC_020908:2788852:280604628060462806777732Octadecabacter arcticus 238, complete genomehypothetical protein1e-40166
NC_020209:3262000:328315832831583283607450Pseudomonas poae RE*1-1-14, complete genomehypothetical protein3e-36151
NC_013923:363500:113871138712028642Natrialba magadii ATCC 43099 plasmid pNMAG01, complete sequencehypothetical protein7e-33140
NC_016628:1:195195518324Vibrio furnissii NCTC 11218 chromosome 2, complete sequencehypothetical protein8e-32136
NC_014033:2080818:209313420931342093718585Prevotella ruminicola 23 chromosome, complete genomehypothetical protein1e-31136
NC_019940:3863124:386897238689723869715744Thioflavicoccus mobilis 8321 chromosome, complete genomehypothetical protein1e-31136
NC_008787:685401:706872706872707465594Campylobacter jejuni subsp. jejuni 81-176, complete genomehypothetical protein6e-1994
NC_010337:1999405:200886320088632009528666Heliobacterium modesticaldum Ice1, complete genomehypothetical protein6e-1064.3
NC_015275:911999:923521923521924198678Clostridium lentocellum DSM 5427 chromosome, complete genomehypothetical protein5e-0754.3
NC_012491:3736167:374127137412713742002732Brevibacillus brevis NBRC 100599, complete genomehypothetical protein7e-0753.9