Pre_GI: BLASTP Hits

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Query: NC_013716:5141269:5164743 Citrobacter rodentium ICC168, complete genome

Start: 5164743, End: 5166293, Length: 1551

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004603:1464000:1464948146494814665431596Vibrio parahaemolyticus RIMD 2210633 chromosome I, completehypothetical protein0662
NC_009012:1901492:1906032190603219075761545Clostridium thermocellum ATCC 27405, complete genomehypothetical protein6e-102371
NC_016627:1960097:1972371197237119739001530Clostridium clariflavum DSM 19732 chromosome, complete genomeglycine radical enzyme, YjjI family1e-98360