Pre_GI: BLASTP Hits

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Query: NC_013716:5141269:5154430 Citrobacter rodentium ICC168, complete genome

Start: 5154430, End: 5155059, Length: 630

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013941:1963523:196488119648811965531651Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein3e-94344
NC_013353:3669500:367720636772063677844639Escherichia coli O103:H2 str. 12009, complete genomeT3SS effector NleG4e-52204
AP010958:3669500:367720636772063677844639Escherichia coli O103:H2 str. 12009 DNA, complete genomeT3SS secreted effector NleG-homolog4e-52204
NC_002655:2264773:227568422756842276331648Escherichia coli O157:H7 EDL933, complete genomehypothetical protein1e-47189
NC_002695:1794635:181084618108461811493648Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein1e-47189
NC_013008:1715831:173141217314121732059648Escherichia coli O157:H7 str. TW14359 chromosome, complete genomenon-LEE-encoded type III effector1e-47189
NC_013361:1754346:176996317699631770610648Escherichia coli O26:H11 str. 11368 chromosome, complete genomeT3SS effector NleG1e-47189
NC_013364:1997891:200658620065862007233648Escherichia coli O111:H- str. 11128, complete genomeT3SS secreted effector NleG-like protein1e-47189
NC_013716:4306695:433002543300254330666642Citrobacter rodentium ICC168, complete genomeputative T3SS effector protein NleG86e-47187
NC_013941:338121:346007346007346633627Escherichia coli O55:H7 str. CB9615 chromosome, complete genomePotB6e-44177
NC_013008:3525428:353674135367413537391651Escherichia coli O157:H7 str. TW14359 chromosome, complete genomenon-LEE-encoded type III effector1e-43176
NC_002695:3468873:347775634777563478406651Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein1e-43176
NC_002655:3538656:354760535476053548255651Escherichia coli O157:H7 EDL933, complete genomehypothetical protein1e-43176
AP010958:2134556:214221121422112142861651Escherichia coli O103:H2 str. 12009 DNA, complete genomeT3SS secreted effector NleG-like protein4e-43174
NC_013353:2134556:214221121422112142861651Escherichia coli O103:H2 str. 12009, complete genomeT3SS effector NleG4e-43174
NC_013364:4990365:499803249980324998682651Escherichia coli O111:H- str. 11128, complete genomeT3SS secreted effector NleG-like protein7e-43173
NC_011353:1716037:173243717324371732967531Escherichia coli O157:H7 str. EC4115 chromosome, complete genomehypothetical protein1e-37155
NC_013361:1593543:161105716110571611692636Escherichia coli O26:H11 str. 11368 chromosome, complete genomeT3SS effector NleG4e-28124
NC_013353:2134556:214412621441262144761636Escherichia coli O103:H2 str. 12009, complete genomeT3SS effector NleG4e-28124
AP010958:2134556:214412621441262144761636Escherichia coli O103:H2 str. 12009 DNA, complete genomeT3SS secreted effector NleG-like protein4e-28124
NC_002695:2158314:215944121594412160070630Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein1e-27123
NC_013361:1896446:191590919159091916538630Escherichia coli O26:H11 str. 11368 chromosome, complete genomeT3SS effector NleG2e-27122
NC_002655:1909139:192840019284001929029630Escherichia coli O157:H7 EDL933, complete genomehypothetical protein6e-27120
NC_013364:1997891:200365520036552004305651Escherichia coli O111:H- str. 11128, complete genomeT3SS secreted effector NleG-like protein6e-26117
NC_013361:1754346:177289117728911773541651Escherichia coli O26:H11 str. 11368 chromosome, complete genomeT3SS effector NleG6e-26117
NC_002655:3538656:354952235495223550001480Escherichia coli O157:H7 EDL933, complete genomehypothetical protein5e-23107
NC_002695:3468873:347967334796733480095423Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein1e-21103
NC_013364:4990365:499634349963434996765423Escherichia coli O111:H- str. 11128, complete genome1e-21103
NC_013008:3525428:353865835386583539065408Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein1e-21102
NC_011353:3573641:358378135837813584188408Escherichia coli O157:H7 str. EC4115 chromosome, complete genomehypothetical protein1e-21102
NC_013353:867869:878563878563879138576Escherichia coli O103:H2 str. 12009, complete genomeT3SS effector NleG1e-20100
AP010958:867869:878563878563879138576Escherichia coli O103:H2 str. 12009 DNA, complete genomeT3SS secreted effector NleG-homolog1e-20100
NC_013364:2898964:290617629061762906709534Escherichia coli O111:H- str. 11128, complete genomeT3SS secreted effector NleG-like protein1e-20100
NC_002655:2264773:227275322727532273262510Escherichia coli O157:H7 EDL933, complete genomehypothetical protein1e-2099.4
NC_013361:1896446:191662019166201917261642Escherichia coli O26:H11 str. 11368 chromosome, complete genomeT3SS effector NleG1e-1892.8
NC_013716:1756545:176490517649051765489585Citrobacter rodentium ICC168, complete genomeputative T3SS effector protein NleG12e-1892
NC_015761:2227500:222786822278682228533666Salmonella bongori NCTC 12419, complete genometype III secretion system effector protein3e-1892
NC_002695:2158314:215871821587182159359642Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein9e-1890.1
NC_002655:1909139:192911119291111929752642Escherichia coli O157:H7 EDL933, complete genomehypothetical protein9e-1890.1
NC_013941:338121:344689344689345267579Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein1e-1789.7
AP010958:2134556:214484021448402145412573Escherichia coli O103:H2 str. 12009 DNA, complete genomeT3SS secreted effector NleG-like protein2e-1789
NC_013353:2134556:214484021448402145412573Escherichia coli O103:H2 str. 12009, complete genomeT3SS effector NleG2e-1789
NC_013361:1593543:161040816104081610989582Escherichia coli O26:H11 str. 11368 chromosome, complete genomeT3SS effector NleG3e-1788.2
NC_011601:1077548:108440310844031084981579Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeT3SS secreted effector NleI/NleG-like protein4e-1787.8
NC_015761:1017301:103065610306561031234579Salmonella bongori NCTC 12419, complete genometype III secretion system effector protein9e-1786.7
NC_013008:1715831:172123717212371721767531Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein1e-1686.3
NC_002655:2264773:228597622859762286506531Escherichia coli O157:H7 EDL933, complete genomeunknown protein encoded by cryptic prophage CP-933P1e-1686.3
NC_013361:1754346:176223017622301762772543Escherichia coli O26:H11 str. 11368 chromosome, complete genomeT3SS effector NleG2e-1685.9
NC_013941:1963523:196624219662421966817576Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein3e-1685.5
NC_013361:1593543:160954216095421610117576Escherichia coli O26:H11 str. 11368 chromosome, complete genomeT3SS effector NleI/NleG3e-1685.5
NC_002695:2158314:216014321601432160718576Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein9e-1683.6
NC_002655:1909139:192775219277521928327576Escherichia coli O157:H7 EDL933, complete genomehypothetical protein9e-1683.6
NC_013361:1896446:191526119152611915836576Escherichia coli O26:H11 str. 11368 chromosome, complete genomeT3SS effector NleG2e-1582.4
NC_013364:863209:885263885263885598336Escherichia coli O111:H- str. 11128, complete genome3e-1478.6