Pre_GI: BLASTP Hits

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Query: NC_013716:5141269:5142981 Citrobacter rodentium ICC168, complete genome

Start: 5142981, End: 5143064, Length: 84

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013716:5141269:51428625142862514294584Citrobacter rodentium ICC168, complete genometRNA-Leu2e-0651.2
NC_013716:5141269:51430965143096514317984Citrobacter rodentium ICC168, complete genometRNA-Leu2e-0651.2
NC_011750:5045927:50485295048529504861587Escherichia coli IAI39 chromosome, complete genometRNA-Leu2e-0651.2
NC_011750:5045927:50487655048765504885187Escherichia coli IAI39 chromosome, complete genometRNA-Leu2e-0651.2
NC_011750:5045927:50486505048650504873687Escherichia coli IAI39 chromosome, complete genometRNA-Leu2e-0651.2