Pre_GI: BLASTP Hits

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Query: NC_013716:5020204:5030534 Citrobacter rodentium ICC168, complete genome

Start: 5030534, End: 5030713, Length: 180

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009778:1717458:172143917214391722233795Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein3e-25113
NC_017328:4417000:443499444349944435893900Shigella flexneri 2002017 chromosome, complete genomeISEhe3, transposase orfB4e-24110
NC_014121:3627588:367339236733923673622231Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative transposase6e-24109
NC_004431:4270305:429326642932664294078813Escherichia coli CFT073, complete genomeTransposase insF for insertion sequence IS3A/B/C/D/E/fA5e-24109
NC_009800:349592:357214357214358026813Escherichia coli HS, complete genomeISEhe3, transposase orfB4e-24109
NC_009800:2788164:280128728012872802099813Escherichia coli HS, complete genomeISEhe3, transposase orfB4e-24109
NC_004337:4374500:439136943913694392181813Shigella flexneri 2a str. 301, complete genomehypothetical protein4e-24109
NC_009800:4529504:453630045363004537112813Escherichia coli HS, complete genomeISEhe3, transposase orfB4e-24109
NC_009800:320115:328857328857329669813Escherichia coli HS, complete genomeISEhe3, transposase orfB4e-24109
NC_009800:1254409:126333312633331264145813Escherichia coli HS, complete genomeISEhe3, transposase orfB4e-24109
NC_014107:171170:193845193845194657813Enterobacter cloacae subsp. cloacae ATCC 13047 plasmid pECL_A,ISEhe3 orfB4e-24109
NC_009800:2049346:205323320532332054045813Escherichia coli HS, complete genomeISEhe3, transposase orfB4e-24109
NC_004337:3590323:360722836072283608040813Shigella flexneri 2a str. 301, complete genomehypothetical protein4e-24109
NC_009800:289000:297039297039297851813Escherichia coli HS, complete genomeISEhe3, transposase orfB4e-24109
NC_014121:3553809:356632335663233567135813Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein4e-24109
NC_004741:2009769:200976920097692010581813Shigella flexneri 2a str. 2457T, complete genomeISEhe3 orfB4e-24109
NC_014121:398012:408385408385409197813Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative transposase7e-24108
NC_014121:2745097:275306827530682753880813Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeISEhe3 transposase B7e-24108
NC_014121:4299500:431841143184114319223813Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeISEhe3 orfB7e-24108
NC_011742:4655373:466957346695734670385813Escherichia coli S88 chromosome, complete genomeTransposase insF for insertion sequence IS3A/B/C/D/E/fA2e-23107
NC_008563:4739333:475491147549114755723813Escherichia coli APEC O1, complete genometransposase insF for insertion sequence IS3A/B/C/D/E/fA2e-23107
NC_014563:19307:249842498425598615Pantoea vagans C9-1 plasmid pPag2, complete sequencePutative transposase for insertion sequence element IS986/IS61106e-23105
NC_016810:604813:613262613262613552291Salmonella enterica subsp. enterica serovar Typhimurium str1e-21102
NC_004631:2366335:237505023750502375391342Salmonella enterica subsp. enterica serovar Typhi Ty2, complete1e-21102
NC_003198:598000:605710605710606051342Salmonella enterica subsp. enterica serovar Typhi str. CT18,1e-21102
NC_011294:585500:593253593253593522270Salmonella enterica subsp. enterica serovar Enteritidis str1e-21102
NC_011147:2247460:225565722556572256001345Salmonella enterica subsp. enterica serovar Paratyphi A str9e-22102
NC_010694:63654:760527605276264213Erwinia tasmaniensis, complete genome1e-21101
NC_020829:1307736:132143413214341322279846Pseudomonas denitrificans ATCC 13867, complete genomeIS3 family transposase1e-1685.1
NC_020829:5174354:518542451854245186269846Pseudomonas denitrificans ATCC 13867, complete genomeIS3 family transposase1e-1685.1
NC_009434:2006500:201055920105592011404846Pseudomonas stutzeri A1501, complete genomeIS3 family transposase1e-1685.1
NC_009434:1580205:159652815965281597373846Pseudomonas stutzeri A1501, complete genomeIS3 family transposase1e-1685.1
NC_020829:3434736:344249334424933443338846Pseudomonas denitrificans ATCC 13867, complete genomeIS3 family transposase1e-1685.1
NC_013956:3641368:364815836481583648631474Pantoea ananatis LMG 20103 chromosome, complete genomeInsK1e-1684.7
NC_009512:469000:479578479578480273696Pseudomonas putida F1, complete genomeIntegrase, catalytic region7e-1682.8
NC_015733:3736104:379242937924293793310882Pseudomonas putida S16 chromosome, complete genomeIntegrase catalytic subunit7e-1682.4
NC_010322:3315024:332427833242783325159882Pseudomonas putida GB-1 chromosome, complete genomeintegrase catalytic subunit1e-1581.6
NC_010322:1817598:182422118242211825102882Pseudomonas putida GB-1 chromosome, complete genomeintegrase catalytic subunit1e-1581.6
NC_010322:6037566:605724760572476058080834Pseudomonas putida GB-1 chromosome, complete genomeintegrase catalytic subunit1e-1581.6
NC_008260:2340824:236835323683532369225873Alcanivorax borkumensis SK2, complete genometransposase subunit B, putative2e-1581.3
NC_006512:1722138:174141417414141742037624Idiomarina loihiensis L2TR, complete genomeTransposase Tra5 related protein2e-1581.3
NC_013959:1555799:156112015611201561551432Sideroxydans lithotrophicus ES-1 chromosome, complete genome2e-1581.3
NC_009348:1475955:151873715187371519465729Aeromonas salmonicida subsp. salmonicida A449, complete genomeIS3 family transposase3e-1580.5
NC_009348:2247500:226338922633892264117729Aeromonas salmonicida subsp. salmonicida A449, complete genomeIS3 family transposase3e-1580.5
NC_009350:137645:143186143186143914729Aeromonas salmonicida subsp. salmonicida A449 plasmid 5, completeIS3 family transposase3e-1580.5
NC_009348:2247500:225912722591272259855729Aeromonas salmonicida subsp. salmonicida A449, complete genomeIS3 family transposase3e-1580.5
NC_009348:47974:695766957670304729Aeromonas salmonicida subsp. salmonicida A449, complete genomeIS3 family transposase3e-1580.5
NC_009348:2247500:225246122524612253189729Aeromonas salmonicida subsp. salmonicida A449, complete genomeIS3 family transposase3e-1580.5
NC_009348:381752:386194386194386922729Aeromonas salmonicida subsp. salmonicida A449, complete genomeIS3 family transposase3e-1580.5
NC_009348:3029963:303600830360083036787780Aeromonas salmonicida subsp. salmonicida A449, complete genomeIS3 family transposase3e-1580.1
NC_015733:715947:737946737946738827882Pseudomonas putida S16 chromosome, complete genomeIntegrase catalytic subunit3e-1580.1
NC_015733:4130000:413681841368184137699882Pseudomonas putida S16 chromosome, complete genomeIS3, transposase3e-1580.1
NC_016002:2453919:246195324619532462183231Pseudogulbenkiania sp. NH8B, complete genomeIS3 family transposase5e-1579.7
NC_007498:1562270:157675615767561577628873Pelobacter carbinolicus DSM 2380, complete genomeIS3 putative transposase1e-1478.6
NC_010694:2971170:299531329953132996164852Erwinia tasmaniensis, complete genometransposase (IS3 family, orf B), similar to ISPsy261e-1478.6
NC_009832:426993:434715434715435566852Serratia proteamaculans 568, complete genomeIntegrase catalytic region3e-1477
NC_009832:2211154:222441022244102225261852Serratia proteamaculans 568, complete genomeIntegrase catalytic region3e-1477
NC_009832:4564752:461440046144004615251852Serratia proteamaculans 568, complete genomeIntegrase catalytic region3e-1477
NC_009832:2460027:246811024681102468961852Serratia proteamaculans 568, complete genomeIntegrase catalytic region3e-1477
NC_008577:2818546:283841428384142838917504Shewanella sp. ANA-3 chromosome 1, complete sequenceIntegrase, catalytic region8e-1475.9
NC_010943:1884695:189673618967361897587852Stenotrophomonas maltophilia K279a, complete genomeputative ISXac3 like transposase integrase1e-1375.1
NC_010943:493002:503011503011503862852Stenotrophomonas maltophilia K279a, complete genomeputative ISXac3 like transposase1e-1375.1
NC_010943:2499092:251988125198812520732852Stenotrophomonas maltophilia K279a, complete genomeputative ISXac3 like element protein1e-1375.1
NC_003919:3812778:382924238292423830060819Xanthomonas axonopodis pv. citri str. 306, complete genomeISxac3 transposase2e-1374.7
NC_003919:1203405:122745312274531228271819Xanthomonas axonopodis pv. citri str. 306, complete genomeISxac3 transposase2e-1374.7
NC_003919:169510:184607184607185425819Xanthomonas axonopodis pv. citri str. 306, complete genomeISxac3 transposase2e-1374.7
NC_015422:3513689:352876435287643529588825Alicycliphilus denitrificans K601 chromosome, complete genomeintegrase catalytic subunit2e-1374.7
NC_008321:3815940:382479138247913825630840Shewanella sp. MR-4, complete genomeIntegrase, catalytic region2e-1374.3
NC_013943:2857751:286720728672072868067861Denitrovibrio acetiphilus DSM 12809 chromosome, complete genomeintegrase catalytic subunit2e-1373.9
NC_003902:1858349:190236819023681903195828Xanthomonas campestris pv. campestris str. ATCC 33913, completeISxac3 transposase4e-1373.6
NC_011992:3375929:339601233960123396887876Acidovorax ebreus TPSY, complete genomeIntegrase catalytic region4e-1373.6
NC_010688:2781624:281626128162612817115855Xanthomonas campestris pv. campestris, complete genomeISXac3 transposase4e-1373.6
NC_010717:4787750:479286047928604793639780Xanthomonas oryzae pv. oryzae PXO99A, complete genomeISxac3 transposase4e-1373.6
NC_003902:4430621:444018144401814441035855Xanthomonas campestris pv. campestris str. ATCC 33913, completeISxac3 transposase5e-1373.2
NC_007086:1224867:125874012587401259018279Xanthomonas campestris pv. campestris str. 8004, complete genome5e-1373.2
NC_003902:4252000:426627942662794266566288Xanthomonas campestris pv. campestris str. ATCC 33913, completetruncated ISxac3 transposase5e-1373.2
NC_008782:1917634:192633519263351927159825Acidovorax sp. JS42, complete genomeIntegrase, catalytic region4e-1373.2
NC_003902:3666544:368823836882383689056819Xanthomonas campestris pv. campestris str. ATCC 33913, completedegenerated ISxac3 transposase6e-1372.8
NC_007086:4610819:462578446257844626602819Xanthomonas campestris pv. campestris str. 8004, complete genomeISxac3 transposase6e-1372.8
NC_007086:3118116:313660631366063137460855Xanthomonas campestris pv. campestris str. 8004, complete genomeISxac3 transposase8e-1372.4
NC_003902:3430051:343646134364613437288828Xanthomonas campestris pv. campestris str. ATCC 33913, completeISxac3 transposase1e-1272
NC_007086:1457531:147350714735071474334828Xanthomonas campestris pv. campestris str. 8004, complete genomeISxac3 transposase1e-1272
NC_012969:1574330:157832415783241579139816Methylovorus glucosetrophus SIP3-4 chromosome, complete genomeintegrase catalytic subunit9e-1372
NC_010688:3229820:325316032531603254014855Xanthomonas campestris pv. campestris, complete genomeISxac3 transposase1e-1271.6
NC_007086:4489153:449776444977644498618855Xanthomonas campestris pv. campestris str. 8004, complete genomeISxac3 transposase1e-1271.6
NC_010943:2422838:244204924420492442900852Stenotrophomonas maltophilia K279a, complete genomeputative transposase1e-1271.6
NC_007507:11000:275032750328321819Xanthomonas campestris pv. vesicatoria str. 85-10 plasmid pXCV183,ISxac3 transposase1e-1271.6
NC_009720:5079048:509706450970645097420357Xanthobacter autotrophicus Py2, complete genometransposase1e-1168.6
NC_010557:316000:322419322419322919501Burkholderia ambifaria MC40-6 chromosome 3, complete sequenceIntegrase catalytic region2e-1167.8
NC_009720:622262:636297636297637172876Xanthobacter autotrophicus Py2, complete genomeintegrase catalytic region8e-1165.9
NC_009720:750612:772896772896773771876Xanthobacter autotrophicus Py2, complete genomeintegrase catalytic region8e-1165.9
NC_009720:2945655:295604929560492956924876Xanthobacter autotrophicus Py2, complete genomeintegrase catalytic region8e-1165.9
NC_010515:1678487:172335817233581724209852Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceIntegrase catalytic region8e-1165.9
NC_007974:2048000:205556820555682056419852Ralstonia metallidurans CH34 chromosome 2, complete sequenceIntegrase, catalytic region3e-1063.9
NC_012968:2000218:201176820117682012577810Methylotenera mobilis JLW8, complete genomeIntegrase catalytic region2e-0961.2
NC_011992:2279752:231060923106092311451843Acidovorax ebreus TPSY, complete genomeIntegrase catalytic region8e-0959.3
NC_011992:3550566:355467035546703555512843Acidovorax ebreus TPSY, complete genomeIntegrase catalytic region8e-0959.3
NC_015663:5253242:527233852723385272670333Enterobacter aerogenes KCTC 2190 chromosome, complete genomeintegrase catalytic subunit2e-0857.8
NC_009049:1934398:196732019673201967655336Rhodobacter sphaeroides ATCC 17029 chromosome 1, complete sequencehypothetical protein3e-0857.4
NC_013508:1491945:149601514960151496818804Edwardsiella tarda EIB202, complete genomeintegrase catalytic region4e-0857
NC_014500:1862000:190391319039131904722810Dickeya dadantii 3937 chromosome, complete genomeISEch10 OrfB5e-0856.6
NC_012779:2856051:287314228731422873435294Edwardsiella ictaluri 93-146, complete genomehypothetical protein5e-0856.6
NC_013716:5141269:514676451467645147576813Citrobacter rodentium ICC168, complete genomeISEc14 transposase B5e-0856.2
NC_013716:3512950:355874135587413559553813Citrobacter rodentium ICC168, complete genomeISEc14 transposase B5e-0856.2
NC_013716:1756545:176603117660311766843813Citrobacter rodentium ICC168, complete genomeISEc14 transposase B5e-0856.2
NC_013716:2764550:277635627763562777165810Citrobacter rodentium ICC168, complete genomeISEc14 transposase B6e-0856.2
NC_013716:3109700:314267231426723143481810Citrobacter rodentium ICC168, complete genomeISEc14 transposase B6e-0856.2
NC_012214:1355500:137469713746971375506810Erwinia pyrifoliae Ep1/96, complete genomeputative transposase7e-0855.8
NC_017506:1100679:112809711280971128906810Marinobacter adhaerens HP15 chromosome, complete genomeintegrase catalytic subunit1e-0755.5
NC_010002:3980832:398701239870123987191180Delftia acidovorans SPH-1, complete genometransposase4e-0753.5
NC_008209:3313087:331983133198313320646816Roseobacter denitrificans OCh 114, complete genometransposase, putative5e-0753.1
NC_010508:1980689:198933519893351989472138Burkholderia cenocepacia MC0-3 chromosome 1, complete sequence5e-0753.1
NC_020210:788639:798882798882799505624Geobacillus sp. GHH01, complete genomeputative transposase7e-0752.8
NC_013722:2150882:217453621745362174889354Xanthomonas albilineans, complete genomeputative isxac3 transposase orfb (fragment) protein8e-0752.4
NC_018868:3036205:305799630579963058862867Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genometransposase-like protein1e-0652
NC_018868:3036205:305328030532803054146867Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genometransposase-like protein1e-0652
NC_007404:974461:984317984317985036720Thiobacillus denitrificans ATCC 25259, complete genometransposase InsF for insertion sequence IS3A/B/C/D/E/fA1e-0651.6
NC_010338:588000:601605601605602465861Caulobacter sp. K31, complete genomeIntegrase catalytic region2e-0651.2
NC_010338:359940:381642381642382502861Caulobacter sp. K31, complete genomeIntegrase catalytic region2e-0651.2
NC_010338:2136193:214825321482532149113861Caulobacter sp. K31, complete genomeIntegrase catalytic region2e-0651.2
NC_010338:4015928:404269540426954043555861Caulobacter sp. K31, complete genomeIntegrase catalytic region2e-0650.8
NC_013739:717352:728340728340728555216Conexibacter woesei DSM 14684, complete genome2e-0650.8
NC_009138:2242470:224824522482452249111867Herminiimonas arsenicoxydans, complete genometransposase2e-0650.8
NC_009138:1138917:115953211595321160398867Herminiimonas arsenicoxydans, complete genometransposase2e-0650.8
NC_009138:2110500:211491621149162115782867Herminiimonas arsenicoxydans, complete genometransposase2e-0650.8
NC_005139:1784000:187923418792341880085852Vibrio vulnificus YJ016 chromosome I, complete sequencetransposase and inactivated derivative3e-0650.4
NC_005139:1784000:179802817980281798879852Vibrio vulnificus YJ016 chromosome I, complete sequencetransposase and inactivated derivative3e-0650.4
NC_005139:1784000:185934218593421860193852Vibrio vulnificus YJ016 chromosome I, complete sequencetransposase and inactivated derivative3e-0650.4
NC_005139:1784000:185545318554531856304852Vibrio vulnificus YJ016 chromosome I, complete sequencetransposase and inactivated derivative3e-0650.4
NC_005139:1784000:183049018304901831341852Vibrio vulnificus YJ016 chromosome I, complete sequencetransposase and inactivated derivative3e-0650.4
NC_009921:1668306:167677816767781677692915Frankia sp. EAN1pec, complete genomeIntegrase catalytic region3e-0650.4
NC_008095:2071500:209154720915472092074528Myxococcus xanthus DK 1622, complete genometransposase orfB, IS3 family3e-0650.4
NC_015660:487506:526841526841527698858Geobacillus thermoglucosidasius C56-YS93 chromosome, completeintegrase catalytic subunit6e-0649.7
NC_020302:85821:126111126111126356246Corynebacterium halotolerans YIM 70093 = DSM 44683, completetransposase for insertion sequence element6e-0649.7
NC_011567:2405000:240566024056602406490831Anoxybacillus flavithermus WK1, complete genomeTransposase5e-0649.7
NC_011567:2405000:242213724221372422967831Anoxybacillus flavithermus WK1, complete genomeTransposase5e-0649.7
NC_020302:744956:769562769562770461900Corynebacterium halotolerans YIM 70093 = DSM 44683, completetransposase5e-0649.7
NC_008576:1413778:141291214129121413781870Magnetococcus sp. MC-1, complete genomeIntegrase, catalytic region8e-0649.3
NC_007519:1244198:125241912524191253237819Desulfovibrio alaskensis G20 chromosome, complete genomeputative transposase B8e-0649.3
NC_008576:2458573:246664424666442467513870Magnetococcus sp. MC-1, complete genomeIntegrase, catalytic region8e-0649.3
NC_009328:814530:824496824496825326831Geobacillus thermodenitrificans NG80-2 chromosome, complete genometransposase7e-0649.3
NC_020302:2219378:223973322397332239978246Corynebacterium halotolerans YIM 70093 = DSM 44683, completetransposase for insertion sequence element8e-0648.9
NC_007907:808893:823260823260824249990Desulfitobacterium hafniense Y51, complete genomehypothetical protein8e-0648.9
NC_014650:1862165:187360618736061874436831Geobacillus sp. Y4.1MC1 chromosome, complete genomeIntegrase catalytic subunit9e-0648.9
NC_008576:3331825:334385433438543344723870Magnetococcus sp. MC-1, complete genomeIntegrase, catalytic region1e-0548.9