Pre_GI: BLASTP Hits

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Query: NC_013716:4885776:4895089 Citrobacter rodentium ICC168, complete genome

Start: 4895089, End: 4895718, Length: 630

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020063:528296:529346529346529975630Enterobacteriaceae bacterium strain FGI 57, complete genome23S rRNA Um-2552 2'-O-methyltransferase2e-116417
NC_015968:4117835:415950241595024160128627Enterobacter asburiae LF7a chromosome, complete genomeribosomal RNA large subunit methyltransferase E7e-113405
NC_012880:3915500:392761839276183928247630Dickeya dadantii Ech703, complete genomeribosomal RNA large subunit methyltransferase J9e-111399
NC_012560:4311906:432910743291074329730624Azotobacter vinelandii DJ, complete genomeribosomal RNA large subunit methyltransferase J/FtsJ5e-68256
NC_021150:4311902:432910343291034329726624Azotobacter vinelandii CA6, complete genomeribosomal RNA large subunit methyltransferase J/FtsJ5e-68256
NC_004129:957890:964774964774965403630Pseudomonas fluorescens Pf-5, complete genomeribosomal RNA large subunit methyltransferase J2e-67254
NC_020075:114790:117612117612118238627Candidatus Blochmannia chromaiodes str. 640, complete genomeribosomal RNA large subunit methyltransferase E2e-66251
NC_017259:388000:406824406824407444621Buchnera aphidicola str. Ua (Uroleucon ambrosiae) chromosome,cell division protein FtsJ2e-65248
NC_002528:404545:424252424252424872621Buchnera aphidicola str. APS (Acyrthosiphon pisum), completecell division protein FtsJ3e-65248
NC_008740:443274:446439446439447062624Marinobacter aquaeolei VT8, complete genomeribosomal RNA methyltransferase RrmJ/FtsJ9e-65246
NC_015581:771482:775232775232775849618Thioalkalimicrobium cyclicum ALM1 chromosome, complete genomeRibosomal RNA large subunit methyltransferase E5e-63240
NC_009654:1123709:113542511354251136015591Marinomonas sp. MWYL1, complete genomeribosomal RNA methyltransferase RrmJ/FtsJ7e-63239
NC_005061:96536:105196105196105816621Candidatus Blochmannia floridanus, complete genomecell division protein 23S rRNA methyltransferase FtsJ1e-59229
NC_014909:86000:109668109668110321654Candidatus Blochmannia vafer str. BVAF chromosome, complete genomeribosomal RNA large subunit methyltransferase, ftsJ-like protein9e-58223
NC_004545:392685:405411405411406043633Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genomeribosomal RNA large subunit methyltransferase J4e-57220
NC_008702:1514707:151470715147071515324618Azoarcus sp. BH72, complete genomeribosomal RNA large subunit methyltransferase j7e-57220
NC_016893:563890:568641568641569252612Wigglesworthia glossinidia endosymbiont of Glossina morsitans23 S rRNA methyltransferase1e-48192
NC_010524:3094303:310479231047923105490699Leptothrix cholodnii SP-6, complete genomeribosomal RNA methyltransferase RrmJ/FtsJ6e-45180
NC_016078:913713:933866933866934582717Pelagibacterium halotolerans B2 chromosome, complete genomecell division protein FtsJ / ribosomal RNA large subunit methyltransferase J1e-43176
NC_019814:320260:333156333156333791636Candidatus Kinetoplastibacterium blastocrithidii (ex Strigomonas23S rRNA (uridine2552-2'-O)-methyltransferase7e-43173
NC_007626:4135961:416184241618424162576735Magnetospirillum magneticum AMB-1, complete genome23S rRNA methylase1e-42172
NC_003901:2727361:272736127273612728167807Methanosarcina mazei Go1, complete genomemethyltransferase2e-41168
NC_020299:149118:162017162017162652636Candidatus Kinetoplastibacterium oncopeltii TCC290E, completeribosomal RNA large subunit methyltransferase E2e-41168
NC_019815:782987:792224792224792859636Candidatus Kinetoplastibacterium crithidii (ex Angomonas deanei23S rRNA (uridine2552-2'-O)-methyltransferase6e-40164
NC_018876:996855:996855996855997631777Methanolobus psychrophilus R15 chromosome, complete genomeribosomal RNA methyltransferase RrmJ/FtsJ3e-37154
NC_007681:402773:427007427007427627621Methanosphaera stadtmanae DSM 3091, complete genomeputative 23S rRNA methylase3e-37154
NC_014932:1232346:123760612376061238322717Bartonella clarridgeiae 73, complete genomecell division protein ftsJ6e-36150
NC_005956:196976:217493217493218236744Bartonella henselae str. Houston-1, complete genomeCell division protein ftsJ1e-35149
NC_010161:205500:226050226050226778729Bartonella tribocorum CIP 105476, complete genomecell division protein ftsJ4e-35147
NC_013926:1270173:127017312701731270760588Aciduliprofundum boonei T469 chromosome, complete genomeribosomal RNA methyltransferase RrmJ/FtsJ4e-35147
NC_020301:174467:200044200044200772729Bartonella vinsonii subsp. berkhoffii str. Winnie, complete genomecell division protein ftsJ5e-35147
NC_005955:173436:193137193137193862726Bartonella quintana str. Toulouse, complete genomeCell division protein ftsJ3e-34144
NC_009515:474285:479993479993480625633Methanobrevibacter smithii ATCC 35061, complete genomecell division protein J (23S rRNA methylase), FtsJ3e-33141
NC_012108:442493:464183464183464794612Desulfobacterium autotrophicum HRM2, complete genomeputative ribosomal RNA methyltransferase 1 (23S rRNA methylase)4e-30130
NC_004344:257471:274162274162274772611Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis,hypothetical protein2e-25115
NC_014330:313813:316946316946317530585Brachyspira pilosicoli 95/1000 chromosome, complete genomeribosomal RNA methyltransferase RrmJ/FtsJ2e-24112
NC_018607:1648607:165223616522361652820585Brachyspira pilosicoli B2904 chromosome, complete genomeribosomal RNA methyltransferase RrmJ/FtsJ2e-24112
NC_018604:1137797:115436211543621154946585Brachyspira pilosicoli WesB complete genomeribosomal RNA methyltransferase RrmJ/FtsJ5e-24110
NC_019908:323375:341282341282341794513Brachyspira pilosicoli P43/6/78 chromosome, complete genomeribosomal RNA methyltransferase RrmJ/FtsJ1e-1996.3
NC_010741:745357:747628747628748230603Treponema pallidum subsp. pallidum SS14, complete genomecell division protein2e-1582
NC_016843:747950:747950747950748552603Treponema pallidum subsp. pertenue str. Gauthier chromosome,23S rRNA methyltransferase2e-1582
NC_016844:748117:748117748117748719603Treponema pallidum subsp. pallidum DAL-1 chromosome, complete23S rRNA methyltransferase2e-1582
NC_017268:747429:747429747429748031603Treponema pallidum subsp. pallidum str. Chicago chromosome,ribosomal RNA large subunit methyltransferase J2e-1582
NC_021508:745388:747659747659748261603Treponema pallidum subsp. pallidum SS14, complete genome23S rRNA methyltransferase2e-1582
NC_015714:741044:741044741044741646603Treponema paraluiscuniculi Cuniculi A chromosome, complete genome23S rRNA methyltransferase2e-1582